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NC_034248.1__YP_009352292.1__B7L88_gp035__00035
Bact-VirNC_034248.1__YP_009352292.1__B7L88_gp035__00035
Identity
- Accession:
- NC_034248 ↗
- Kingdom:
- phage
Quality
82.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-81
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zheB02 | 1.20.190.60 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › | 0.66 | 56.0 | 4.31e-01 | 94.9% | 87.8% |
| 5dxuA03 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.64 | 49.0 | 3.79e-01 | 83.5% | 36.0% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 47.0 | 4.09e-01 | 86.1% | 76.5% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 46.0 | 3.94e-01 | 84.8% | 70.4% |
| 3nxcA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 47.0 | 3.68e-01 | 84.8% | 62.7% |
| 3uo2B02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.55 | 38.0 | 3.82e-01 | 73.4% | 82.1% |
| 3pqaB01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 40.0 | 2.77e-01 | 84.8% | 22.4% |
| 6nmgA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.55 | 46.0 | 3.01e-01 | 98.7% | 32.0% |
| 4nvrA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 45.0 | 3.10e-01 | 98.7% | 90.7% |
| 3vz3A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.52 | 43.0 | 3.05e-01 | 94.9% | 74.9% |
| 2uvaG01 | 1.20.1050.120 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 43.0 | 3.63e-01 | 93.7% | 89.7% |
| 4c3sA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 37.0 | 2.70e-01 | 92.4% | 24.9% |
| 1bxiA00 | 1.10.1200.20 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Colicin E immunity protein | 0.51 | 35.0 | 3.51e-01 | 91.1% | 69.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4014907 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 56.0 | 3.14e-01 | 98.7% | 13.2% |
| 5018187 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.65 | 45.0 | 4.90e-01 | 72.2% | 100.0% |
| 3270478 | 6155.1.1.4 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MPC | 0.62 | 46.0 | 4.19e-01 | 77.2% | 72.4% |
| 4958655 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.59 | 51.0 | 4.03e-01 | 98.7% | 54.3% |
| 4456620 | 4048.1.1.1 ↗ | alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel | 0.59 | 45.0 | 4.76e-01 | 93.7% | 95.7% |
| 3928667 | 3277.2.1.1 ↗ | alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › CHD1-like_C | 0.58 | 43.0 | 4.07e-01 | 79.7% | 86.3% |
| 4013888 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 49.0 | 4.06e-01 | 100.0% | 77.4% |
| 4026324 | 604.39.1.12 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › VTT_dom | 0.57 | 45.0 | 3.82e-01 | 92.4% | 88.0% |
| 3221760 | 604.1.1.140 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF27005 | 0.56 | 39.0 | 3.82e-01 | 72.2% | 87.1% |
| 3574413 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.56 | 46.0 | 4.47e-01 | 92.4% | 100.0% |
| 4274174 | 109.2.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Terpene_synth | 0.56 | 47.0 | 3.47e-01 | 97.5% | 63.4% |
| 5051703 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.53 | 44.0 | 3.13e-01 | 94.9% | 74.1% |
| 4520500 | 601.1.2.47 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › MARVEL | 0.53 | 41.0 | 3.35e-01 | 81.0% | 81.4% |
| 3290299 | 109.4.1.497 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EccD | 0.53 | 45.0 | 3.10e-01 | 100.0% | 38.1% |
| 3343997 | 109.4.1.340 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BP28CT | 0.53 | 44.0 | 3.01e-01 | 100.0% | 39.7% |
| 3397045 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 43.0 | 3.64e-01 | 98.7% | 71.7% |