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NC_041832.1__YP_009590744.1__FDG52_s3gp10__00010
Bact-VirNC_041832.1__YP_009590744.1__FDG52_s3gp10__00010
Identity
- Accession:
- NC_041832 ↗
- Kingdom:
- phage
Quality
82.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Connertonviridae›
Firehammervirus›
Campylobacter_phage_vB_CcoM-IBB_35
TaxID: 2920889
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 23-131_193-206
Domain cluster:
rep: pig_ID_3640_F65_scaffold_1_curated_prodigal-single.1__X__X__00040__D17-121_173-190
CATH (71)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y7oB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.85 | 70.0 | 6.05e-01 | 85.4% | 88.8% |
| 7ekqA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.83 | 68.0 | 5.77e-01 | 85.4% | 88.9% |
| 3bf0C03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.82 | 69.0 | 6.15e-01 | 87.8% | 85.0% |
| 3p5mB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.81 | 66.0 | 5.72e-01 | 84.6% | 94.4% |
| 4mi2B01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.81 | 67.0 | 5.60e-01 | 87.8% | 90.6% |
| 1jxzB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.81 | 67.0 | 5.54e-01 | 87.0% | 90.2% |
| 2vx2A01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.81 | 67.0 | 5.64e-01 | 87.8% | 90.5% |
| 2iexA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.80 | 67.0 | 5.67e-01 | 87.0% | 87.4% |
| 1on3B01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.80 | 67.0 | 5.18e-01 | 87.8% | 60.6% |
| 3lkeB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.80 | 67.0 | 5.19e-01 | 87.8% | 73.7% |
| 1pixA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.80 | 66.0 | 5.30e-01 | 87.0% | 76.0% |
| 1uyvA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.80 | 67.0 | 5.11e-01 | 87.8% | 58.4% |
| 1ef8A02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.80 | 66.0 | 5.71e-01 | 86.2% | 94.4% |
| 4jotA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.80 | 68.0 | 5.55e-01 | 89.4% | 86.3% |
| 5wydA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.80 | 66.0 | 5.49e-01 | 87.0% | 87.7% |
| 3u9rB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.79 | 66.0 | 5.01e-01 | 87.8% | 58.2% |
| 4k2nA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.79 | 66.0 | 5.39e-01 | 87.0% | 86.3% |
| 3hinA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.79 | 65.0 | 5.44e-01 | 87.0% | 87.2% |
| 4k29B00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.79 | 65.0 | 4.96e-01 | 87.0% | 67.2% |
| 1dciA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.79 | 65.0 | 5.35e-01 | 87.0% | 90.6% |
| 6j0pA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.79 | 66.0 | 5.09e-01 | 87.8% | 72.9% |
| 7borA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.79 | 64.0 | 5.57e-01 | 85.4% | 95.0% |
| 4k3wA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.79 | 65.0 | 5.41e-01 | 87.8% | 90.3% |
| 4nnqC01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.78 | 64.0 | 5.66e-01 | 85.4% | 95.2% |
| 4rcnB03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.78 | 66.0 | 5.15e-01 | 90.2% | 61.0% |
| 3sllB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.78 | 64.0 | 5.36e-01 | 87.0% | 89.6% |
| 2j5iA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 65.0 | 5.33e-01 | 87.8% | 88.5% |
| 3qmjA00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 65.0 | 5.30e-01 | 87.8% | 83.9% |
| 4l6wB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 65.0 | 5.69e-01 | 87.8% | 70.1% |
| 4jyjB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 64.0 | 4.87e-01 | 87.0% | 66.0% |
| 5ve2I00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 64.0 | 4.98e-01 | 87.0% | 69.8% |
| 4og1A01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 64.0 | 5.40e-01 | 87.8% | 87.4% |
| 3zwbA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 65.0 | 4.88e-01 | 88.6% | 62.7% |
| 3gkbA00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 65.0 | 4.89e-01 | 88.6% | 67.5% |
| 4jcsA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 63.0 | 5.29e-01 | 87.0% | 88.7% |
| 4wczC01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.76 | 64.0 | 5.41e-01 | 87.8% | 91.8% |
| 3tlfD01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.76 | 63.0 | 5.21e-01 | 87.0% | 89.9% |
| 3laoC01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.75 | 62.0 | 5.13e-01 | 87.0% | 84.3% |
| 3omeB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.75 | 63.0 | 4.97e-01 | 88.6% | 72.3% |
| 3pe8A00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.74 | 61.0 | 4.96e-01 | 87.0% | 73.5% |
| 5o34C00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.72 | 60.0 | 5.08e-01 | 88.6% | 77.6% |
| 3w0lB03 | 3.40.50.12620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 48.0 | 4.65e-01 | 73.2% | 100.0% |
| 5dxfB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.66 | 55.0 | 4.31e-01 | 90.2% | 93.1% |
| 1r30A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 52.0 | 3.87e-01 | 91.1% | 53.2% |
| 5a6sA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 51.0 | 4.40e-01 | 91.1% | 71.1% |
| 6jtdA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 51.0 | 4.03e-01 | 92.7% | 95.5% |
| 4g1vA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.60 | 40.0 | 3.93e-01 | 88.6% | 61.8% |
| 7dfqA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 49.0 | 3.75e-01 | 91.9% | 64.3% |
| 4rk6A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 47.0 | 4.73e-01 | 84.6% | 100.0% |
| 1jqlB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 43.0 | 4.13e-01 | 75.6% | 67.9% |
| 1e2uA04 | 3.40.50.2030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 42.0 | 3.84e-01 | 74.8% | 98.8% |
| 5mn7A01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.59 | 48.0 | 4.41e-01 | 89.4% | 99.4% |
| 2x7xA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 46.0 | 4.58e-01 | 85.4% | 100.0% |
| 3l49A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 46.0 | 4.52e-01 | 83.7% | 100.0% |
| 4joqA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 46.0 | 4.45e-01 | 87.0% | 97.9% |
| 3thaB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 47.0 | 3.78e-01 | 91.1% | 65.9% |
| 3nntA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 47.0 | 3.73e-01 | 91.1% | 62.3% |
| 5u4nA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 46.0 | 3.37e-01 | 89.4% | 48.3% |
| 4pcfC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 46.0 | 3.81e-01 | 91.9% | 70.6% |
| 3kjxA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 44.0 | 4.33e-01 | 84.6% | 100.0% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 46.0 | 3.69e-01 | 92.7% | 51.3% |
| 1j6uA03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.55 | 39.0 | 3.85e-01 | 91.1% | 68.2% |
| 1e8cB03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.54 | 41.0 | 3.97e-01 | 87.8% | 70.4% |
| 2vsnA02 | 3.40.50.11380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 44.0 | 3.63e-01 | 90.2% | 76.7% |
| 4wzzA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 41.0 | 3.76e-01 | 81.3% | 79.9% |
| 4ceiB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 42.0 | 3.69e-01 | 85.4% | 83.9% |
| 3ksmA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 44.0 | 4.11e-01 | 91.9% | 85.3% |
| 1yh0A02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.51 | 42.0 | 3.79e-01 | 88.6% | 89.5% |
| 3q3eA03 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 42.0 | 3.68e-01 | 90.2% | 75.9% |
| 7nadx02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 3.35e-01 | 88.6% | 45.6% |
| 1tq8A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 34.0 | 3.43e-01 | 72.4% | 66.9% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3953161 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.84 | 70.0 | 4.45e-01 | 86.2% | 41.7% |
| 3950506 | 2486.1.1.14 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 | 0.84 | 71.0 | 4.51e-01 | 87.8% | 42.1% |
| 4984269 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.83 | 67.0 | 5.07e-01 | 84.6% | 74.8% |
| 4356494 | 2486.1.1.14 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 | 0.83 | 72.0 | 5.36e-01 | 91.1% | 77.9% |
| 4089356 | 2486.1.1.22 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › SDH_protease, NfeD1b_N | 0.82 | 67.0 | 5.23e-01 | 84.6% | 83.7% |
| 5024925 | 2486.1.1.17 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N | 0.82 | 70.0 | 5.85e-01 | 88.6% | 88.2% |
| 5026361 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.82 | 70.0 | 5.65e-01 | 88.6% | 94.4% |
| 4007097 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.82 | 69.0 | 4.27e-01 | 87.8% | 33.5% |
| 3941785 | 2486.1.1.14 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 | 0.82 | 69.0 | 4.27e-01 | 87.8% | 33.8% |
| 4990878 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.82 | 70.0 | 5.74e-01 | 89.4% | 91.0% |
| 1174289 | 2486.1.1.14 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 | 0.82 | 69.0 | 5.44e-01 | 87.8% | 90.0% |
| 4934553 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.81 | 70.0 | 5.34e-01 | 89.4% | 74.1% |
| 4259068 | 2486.1.1.14 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 | 0.81 | 69.0 | 4.29e-01 | 88.6% | 35.4% |
| 5005177 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.81 | 68.0 | 5.17e-01 | 88.6% | 78.5% |
| 5043511 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.81 | 69.0 | 5.31e-01 | 89.4% | 79.6% |
| 4551220 | 2486.1.1.3 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans | 0.81 | 69.0 | 5.04e-01 | 90.2% | 80.3% |
| 5012787 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.81 | 69.0 | 5.33e-01 | 89.4% | 81.2% |
| 4335500 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.81 | 68.0 | 5.42e-01 | 88.6% | 80.9% |
| 3273502 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.80 | 68.0 | 4.33e-01 | 89.4% | 40.0% |
| 4299578 | 2486.1.1.13 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49+Peptidase_S49_N | 0.80 | 68.0 | 5.31e-01 | 89.4% | 82.9% |
| 4986604 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.80 | 70.0 | 5.41e-01 | 91.9% | 78.4% |
| 5042774 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.80 | 69.0 | 5.33e-01 | 91.1% | 83.5% |
| 4965221 | 2486.1.1.3 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans | 0.80 | 67.0 | 5.10e-01 | 87.8% | 59.6% |
| 1122940 | 2486.1.1.14 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 | 0.80 | 69.0 | 5.53e-01 | 91.1% | 92.5% |
| 3165505 | 2486.1.1.13 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49+Peptidase_S49_N | 0.80 | 68.0 | 4.82e-01 | 90.2% | 59.4% |
| 4084971 | 2486.1.1.13 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49+Peptidase_S49_N | 0.80 | 68.0 | 5.40e-01 | 90.2% | 86.8% |
| 5027164 | 2486.1.1.17 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N | 0.80 | 67.0 | 5.74e-01 | 87.8% | 86.5% |
| 4131089 | 2486.1.1.14 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 | 0.80 | 68.0 | 5.33e-01 | 89.4% | 84.2% |
| 4955509 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.80 | 66.0 | 5.02e-01 | 86.2% | 74.6% |
| 3988620 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.80 | 67.0 | 5.15e-01 | 88.6% | 71.9% |
| 5039057 | 2486.1.1.17 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N | 0.80 | 67.0 | 5.31e-01 | 88.6% | 73.2% |
| 4968967 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.80 | 66.0 | 4.95e-01 | 87.0% | 80.4% |
| 4972926 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.79 | 65.0 | 4.97e-01 | 86.2% | 82.3% |
| 3968901 | 2486.1.1.14 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 | 0.79 | 67.0 | 4.90e-01 | 88.6% | 69.5% |
| 3839857 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.79 | 66.0 | 5.08e-01 | 87.8% | 76.5% |
| 3385872 | 2486.1.1.14 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 | 0.79 | 67.0 | 5.05e-01 | 88.6% | 73.7% |
| 5066620 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.79 | 67.0 | 5.40e-01 | 88.6% | 90.9% |
| 3970789 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.78 | 65.0 | 5.64e-01 | 87.0% | 95.6% |
| 4935462 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.78 | 66.0 | 5.20e-01 | 89.4% | 85.3% |
| 5042373 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.78 | 68.0 | 5.28e-01 | 91.1% | 83.3% |
| 5043495 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.78 | 67.0 | 5.07e-01 | 90.2% | 75.2% |
| 4991919 | 2486.1.1.17 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N | 0.77 | 66.0 | 5.40e-01 | 90.2% | 79.1% |
| 4426658 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.77 | 62.0 | 5.31e-01 | 83.7% | 86.5% |
| 5032586 | 2486.1.1.17 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N | 0.77 | 68.0 | 5.12e-01 | 92.7% | 64.4% |
| 3965266 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.77 | 65.0 | 4.87e-01 | 89.4% | 74.4% |
| 4992730 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.73 | 62.0 | 5.26e-01 | 89.4% | 96.4% |
| 3960691 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.69 | 44.0 | 4.64e-01 | 88.6% | 71.8% |
| 5056383 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.64 | 52.0 | 4.58e-01 | 87.0% | 100.0% |
| 3215691 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.63 | 51.0 | 3.88e-01 | 87.0% | 74.6% |
| 3946629 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.62 | 51.0 | 4.68e-01 | 87.8% | 100.0% |
| 3823446 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.61 | 54.0 | 4.18e-01 | 96.7% | 69.1% |
| 3630848 | 2002.1.1.90 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTHFR | 0.60 | 50.0 | 3.64e-01 | 90.2% | 51.1% |
| 4666952 | 2007.1.18.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) | 0.59 | 48.0 | 3.74e-01 | 88.6% | 67.5% |
| 3760937 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.57 | 42.0 | 3.22e-01 | 76.4% | 33.6% |
| 4946567 | 2007.1.18.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) › MTD | 0.57 | 46.0 | 3.59e-01 | 87.8% | 66.5% |
| None | — | 0.56 | 48.0 | 3.41e-01 | 95.1% | 50.6% | |
| 4147766 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.55 | 45.0 | 3.31e-01 | 87.0% | 37.8% |
| 3834021 | 7516.1.1.69 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_92 | 0.54 | 38.0 | 3.02e-01 | 74.0% | 35.5% |
| 3264162 | 7512.1.1.33 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_41 | 0.54 | 44.0 | 3.64e-01 | 91.1% | 79.5% |
| 4661434 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.54 | 44.0 | 2.82e-01 | 90.2% | 24.7% |
| 3246314 | 7575.1.1.1 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C14 | 0.53 | 45.0 | 3.65e-01 | 93.5% | 84.7% |
| 5072160 | 7542.1.2.3 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › AcnX_2nd | 0.53 | 33.0 | 3.72e-01 | 84.6% | 83.3% |
| 5062539 | 7542.1.2.3 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › AcnX_2nd | 0.52 | 35.0 | 3.79e-01 | 85.4% | 83.0% |
| 3944247 | 7516.1.1.6 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_8 | 0.52 | 38.0 | 2.67e-01 | 87.8% | 22.6% |
| 3521002 | 2003.1.1.80 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › FAS_pseudo-KR | 0.51 | 40.0 | 4.11e-01 | 82.9% | 96.5% |
| 3402634 | 7514.1.1.0 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.50 | 42.0 | 3.83e-01 | 89.4% | 68.1% |
D2
medium
residues 207-260
Domain cluster:
representative
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.93 | 74.0 | 7.28e-01 | 85.2% | 79.3% |
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.92 | 74.0 | 5.70e-01 | 85.2% | 42.2% |
| 1vp7A00 | 1.10.287.1040 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Exonuclease VII, small subunit | 0.92 | 77.0 | 7.01e-01 | 88.9% | 75.0% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.91 | 75.0 | 6.41e-01 | 87.0% | 63.0% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.90 | 72.0 | 6.84e-01 | 85.2% | 74.2% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.89 | 71.0 | 4.97e-01 | 87.0% | 29.5% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.89 | 73.0 | 5.90e-01 | 87.0% | 50.5% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.89 | 73.0 | 6.11e-01 | 87.0% | 77.6% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.88 | 70.0 | 6.14e-01 | 85.2% | 61.0% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.87 | 72.0 | 5.93e-01 | 88.9% | 89.1% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.87 | 79.0 | 7.08e-01 | 100.0% | 94.6% |
| 3rx6A00 | 1.20.58.1090 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer | 0.87 | 69.0 | 4.61e-01 | 85.2% | 26.7% |
| 1yc9A01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.86 | 69.0 | 4.17e-01 | 87.0% | 16.5% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.86 | 68.0 | 4.75e-01 | 85.2% | 57.9% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.86 | 64.0 | 7.00e-01 | 81.5% | 95.6% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.85 | 67.0 | 5.70e-01 | 85.2% | 58.1% |
| 1s5jA04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.85 | 69.0 | 6.63e-01 | 87.0% | 78.7% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.85 | 67.0 | 6.43e-01 | 85.2% | 75.4% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.85 | 68.0 | 5.17e-01 | 87.0% | 39.2% |
| 1orsC00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.84 | 67.0 | 4.99e-01 | 87.0% | 37.1% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.84 | 66.0 | 5.56e-01 | 85.2% | 60.2% |
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.84 | 71.0 | 5.69e-01 | 92.6% | 52.0% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.83 | 65.0 | 5.72e-01 | 85.2% | 63.3% |
| 1twcA01 | 4.10.860.120 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › RNA polymerase II, clamp domain | 0.83 | 52.0 | 3.86e-01 | 85.2% | 26.5% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.82 | 66.0 | 5.83e-01 | 87.0% | 65.4% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 73.0 | 5.54e-01 | 98.1% | 80.3% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.82 | 66.0 | 5.07e-01 | 87.0% | 41.0% |
| 1xzzA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.82 | 61.0 | 3.98e-01 | 83.3% | 19.9% |
| 2o8pA00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.81 | 64.0 | 4.17e-01 | 85.2% | 21.0% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.81 | 61.0 | 5.97e-01 | 81.5% | 84.7% |
| 2ahmG01 | 6.10.250.2820 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.80 | 64.0 | 5.21e-01 | 87.0% | 47.5% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.79 | 62.0 | 6.03e-01 | 85.2% | 86.7% |
| 7ymiD01 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.79 | 62.0 | 4.25e-01 | 85.2% | 58.9% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 60.0 | 5.41e-01 | 85.2% | 64.5% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.78 | 61.0 | 5.68e-01 | 85.2% | 74.6% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.77 | 59.0 | 4.72e-01 | 83.3% | 42.5% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.77 | 52.0 | 4.66e-01 | 72.2% | 49.4% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.77 | 56.0 | 4.15e-01 | 83.3% | 31.6% |
| 1lfkA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.76 | 59.0 | 3.51e-01 | 85.2% | 12.0% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.76 | 52.0 | 5.41e-01 | 74.1% | 78.0% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 60.0 | 5.35e-01 | 85.2% | 67.6% |
| 4jvyB00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.76 | 61.0 | 4.12e-01 | 87.0% | 88.9% |
| 4cpgA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.75 | 53.0 | 4.94e-01 | 77.8% | 59.4% |
| 1gwiA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.75 | 58.0 | 3.46e-01 | 85.2% | 11.4% |
| 2gsqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.74 | 58.0 | 4.67e-01 | 87.0% | 47.2% |
| 1k90B03 | 1.20.140.60 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.73 | 64.0 | 5.04e-01 | 100.0% | 61.7% |
| 4dyqA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 59.0 | 4.73e-01 | 88.9% | 81.6% |
| 4nv0A02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.72 | 53.0 | 4.65e-01 | 81.5% | 52.4% |
| 3eslA01 | 1.20.58.2070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 56.0 | 5.06e-01 | 90.7% | 74.7% |
| 4tpsA00 | 3.30.310.250 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA | 0.69 | 51.0 | 3.69e-01 | 77.8% | 77.9% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.66 | 51.0 | 4.68e-01 | 92.6% | 100.0% |
| 3purA03 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 56.0 | 4.45e-01 | 96.3% | 72.7% |
| 4aefA03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 43.0 | 2.68e-01 | 85.2% | 14.9% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3697996 | 7013.1.1.1 ↗ | alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 | 0.97 | 79.0 | 5.17e-01 | 85.2% | 24.2% |
| 3962991 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.97 | 79.0 | 5.13e-01 | 85.2% | 23.6% |
| 3356933 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.96 | 78.0 | 5.37e-01 | 85.2% | 29.7% |
| 4927671 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.96 | 80.0 | 5.03e-01 | 87.0% | 20.9% |
| 4259224 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.95 | 77.0 | 5.31e-01 | 85.2% | 29.7% |
| 4998688 | 192.2.1.89 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF7121 | 0.95 | 78.0 | 4.88e-01 | 87.0% | 20.4% |
| 3215465 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.94 | 78.0 | 5.62e-01 | 87.0% | 36.2% |
| 5084060 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.93 | 75.0 | 5.21e-01 | 85.2% | 29.7% |
| 3408277 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.93 | 75.0 | 5.68e-01 | 85.2% | 40.0% |
| 4985462 | 192.2.1.89 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF7121 | 0.93 | 76.0 | 4.79e-01 | 87.0% | 20.8% |
| 5020701 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.93 | 76.0 | 4.78e-01 | 87.0% | 21.3% |
| 3967403 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.93 | 75.0 | 6.95e-01 | 85.2% | 70.8% |
| 3916044 | 3684.1.1.35 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › JMY | 0.93 | 74.0 | 5.11e-01 | 85.2% | 28.7% |
| 3594586 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.92 | 75.0 | 6.00e-01 | 85.2% | 48.4% |
| 5081955 | 3834.1.1.25 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 | 0.92 | 74.0 | 4.55e-01 | 85.2% | 17.0% |
| 2456957 | 192.13.1.1 ↗ | alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Isy1 | 0.92 | 74.0 | 7.30e-01 | 85.2% | 82.1% |
| 3783731 | 2004.1.1.505 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 | 0.92 | 73.0 | 4.22e-01 | 85.2% | 11.0% |
| 3294437 | 5086.1.1.110 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HisKA | 0.91 | 75.0 | 6.46e-01 | 87.0% | 58.7% |
| 3705545 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.91 | 74.0 | 4.96e-01 | 85.2% | 26.3% |
| 5005724 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.91 | 75.0 | 4.72e-01 | 87.0% | 21.3% |
| 3957419 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.91 | 73.0 | 6.44e-01 | 85.2% | 61.3% |
| 5070059 | 3834.1.1.25 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 | 0.91 | 74.0 | 4.65e-01 | 87.0% | 18.8% |
| 4957532 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.91 | 74.0 | 5.43e-01 | 87.0% | 38.5% |
| 4033238 | 101.1.2.804 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27113 | 0.91 | 75.0 | 5.02e-01 | 87.0% | 26.9% |
| 4146694 | 192.29.1.277 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Dynamitin | 0.89 | 72.0 | 6.69e-01 | 85.2% | 72.3% |
| 1547205 | 6067.1.1.1 ↗ | alpha arrays › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › SGTA_dimer | 0.89 | 62.0 | 6.72e-01 | 72.2% | 86.7% |
| 3841109 | 192.29.1.293 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › SHCBP_N | 0.89 | 71.0 | 5.65e-01 | 85.2% | 46.0% |
| 4994917 | 3834.1.1.25 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 | 0.88 | 72.0 | 4.54e-01 | 87.0% | 19.2% |
| 4311810 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.88 | 71.0 | 6.30e-01 | 87.0% | 62.7% |
| 4081303 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.88 | 65.0 | 6.79e-01 | 79.6% | 86.0% |
| 3990182 | 3922.1.1.226 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Fy-3 | 0.87 | 69.0 | 5.27e-01 | 85.2% | 40.0% |
| 4232718 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.86 | 70.0 | 5.60e-01 | 87.0% | 47.0% |
| 4192699 | 603.5.1.1 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN | 0.86 | 68.0 | 5.05e-01 | 85.2% | 38.5% |
| 3243299 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.86 | 76.0 | 6.88e-01 | 94.4% | 98.6% |
| 1145756 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.86 | 76.0 | 5.84e-01 | 98.1% | 59.0% |
| 5060201 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.85 | 74.0 | 5.52e-01 | 94.4% | 60.0% |
| 3902657 | 150.1.2.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase | 0.85 | 68.0 | 4.53e-01 | 87.0% | 24.7% |
| 3885709 | 192.13.1.0 ↗ | alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like | 0.85 | 75.0 | 6.58e-01 | 94.4% | 88.0% |
| 3988454 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.84 | 67.0 | 6.17e-01 | 87.0% | 67.1% |
| 3184912 | 109.26.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C | 0.84 | 72.0 | 4.11e-01 | 94.4% | 12.8% |
| 3098420 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.82 | 65.0 | 5.10e-01 | 85.2% | 84.4% |
| 3800207 | 109.4.1.623 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cnd1 | 0.80 | 72.0 | 4.23e-01 | 100.0% | 25.9% |
| 3933449 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.79 | 71.0 | 5.93e-01 | 98.1% | 85.6% |
| 4663904 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.79 | 63.0 | 5.12e-01 | 87.0% | 50.0% |
| 3430711 | 5014.1.1.0 ↗ | extended segments › iron-sulfur subunit (ISP) transmembrane anchor › iron-sulfur subunit (ISP) transmembrane anchor › iron-sulfur subunit (ISP) transmembrane anchor | 0.79 | 62.0 | 5.68e-01 | 85.2% | 72.9% |
| 3314132 | 376.1.6.10 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR, PF26200 | 0.77 | 70.0 | 4.98e-01 | 100.0% | 39.3% |
| 4097040 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.77 | 66.0 | 5.29e-01 | 92.6% | 87.0% |
| 3808540 | 376.1.6.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › PF26200 | 0.76 | 70.0 | 4.95e-01 | 100.0% | 52.0% |
| 3578352 | 109.4.1.884 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_UBP24_USP9X-Y | 0.76 | 64.0 | 4.37e-01 | 94.4% | 48.4% |
| 4003865 | 7516.1.1.3 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2,Glyco_transf_7C | 0.75 | 56.0 | 3.26e-01 | 83.3% | 9.8% |
| 5041087 | 5074.1.1.0 ↗ | extended segments › Bacterial light-harvesting complex subunits › Bacterial light-harvesting complex subunits › Bacterial light-harvesting complex subunits | 0.73 | 56.0 | 5.47e-01 | 85.2% | 76.7% |
| 3264270 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.65 | 53.0 | 3.32e-01 | 96.3% | 16.8% |