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NC_041833.1__YP_009590763.1__FDG52_s4gp07__00007
Bact-VirNC_041833.1__YP_009590763.1__FDG52_s4gp07__00007
Identity
- Accession:
- NC_041833 ↗
- Kingdom:
- phage
Quality
76.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Connertonviridae›
Firehammervirus›
Campylobacter_phage_vB_CcoM-IBB_35
TaxID: 2920889
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-49
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3w8hB00 | 1.10.12.70 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › | 0.77 | 63.0 | 5.69e-01 | 95.8% | 66.7% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.75 | 59.0 | 4.30e-01 | 91.7% | 31.2% |
| 3kxeA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.75 | 60.0 | 4.92e-01 | 93.8% | 79.8% |
| 3swxA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.73 | 58.0 | 5.51e-01 | 87.5% | 75.9% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.71 | 54.0 | 4.04e-01 | 89.6% | 31.3% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 56.0 | 4.54e-01 | 93.8% | 44.9% |
| 3q1pA01 | 6.10.250.1120 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.69 | 49.0 | 5.36e-01 | 75.0% | 94.9% |
| 1vhnA02 | 1.10.1200.80 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 | 0.69 | 54.0 | 4.79e-01 | 87.5% | 60.6% |
| 5d18A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 57.0 | 3.75e-01 | 95.8% | 22.3% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 58.0 | 5.57e-01 | 100.0% | 91.2% |
| 1dd3A01 | 1.20.5.710 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin | 0.66 | 48.0 | 4.65e-01 | 83.3% | 75.4% |
| 2oi8A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.64 | 53.0 | 3.54e-01 | 97.9% | 25.6% |
| 1sqhA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 53.0 | 3.66e-01 | 97.9% | 47.6% |
| 2j5iA02 | 6.10.250.2850 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 42.0 | 4.51e-01 | 77.1% | 94.7% |
| 3k6tB00 | 1.20.5.4010 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 46.0 | 4.67e-01 | 93.8% | 89.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1684826 | 1005.1.1.1 ↗ | alpha arrays › Cell-shape determining Csd6 N-terminal dimerization domain › Cell-shape determining Csd6 N-terminal dimerization domain › Cell-shape determining Csd6 N-terminal dimerization domain › Csd6-like_dimeriz | 0.79 | 62.0 | 6.52e-01 | 83.3% | 93.0% |
| 4979634 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.69 | 58.0 | 4.46e-01 | 100.0% | 40.9% |