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NC_041859.1__YP_009592324.1__FDG69_gp16__00016
Bact-VirNC_041859.1__YP_009592324.1__FDG69_gp16__00016
Identity
- Accession:
- NC_041859 ↗
- Kingdom:
- phage
Quality
87.4
mean pLDDT
Taxonomy
TaxID: 1814279
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-60
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08845.16 best | SymE_toxin | 47.4 | 2.30e-12 | 89.6% | 64.8% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yfbA00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.67 | 49.0 | 4.83e-01 | 100.0% | 75.0% |
| 1mvfD00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.63 | 48.0 | 4.95e-01 | 100.0% | 93.2% |
| 1ub4C00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.61 | 48.0 | 4.20e-01 | 100.0% | 56.0% |
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.61 | 45.0 | 4.40e-01 | 100.0% | 73.7% |
| 3tndB01 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.58 | 42.0 | 4.50e-01 | 100.0% | 92.7% |
| 2a02A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.56 | 40.0 | 3.48e-01 | 77.1% | 96.0% |
| 4ciuA04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 41.0 | 3.50e-01 | 91.7% | 86.0% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 41.0 | 2.51e-01 | 91.7% | 22.0% |
| 3dlsB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 41.0 | 3.29e-01 | 87.5% | 46.9% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.52 | 35.0 | 2.90e-01 | 70.8% | 37.2% |
| 1i72A00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.51 | 35.0 | 2.29e-01 | 75.0% | 14.7% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4534384 | 1.1.3.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › SymE_toxin | 0.92 | 82.0 | 7.83e-01 | 100.0% | 85.2% |
| 4993713 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.76 | 56.0 | 5.36e-01 | 100.0% | 69.1% |
| 4967269 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.73 | 53.0 | 5.15e-01 | 100.0% | 69.1% |
| 5081177 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.73 | 54.0 | 5.58e-01 | 100.0% | 86.7% |
| 5050062 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.73 | 54.0 | 5.09e-01 | 100.0% | 65.0% |
| 5012674 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.72 | 53.0 | 4.67e-01 | 100.0% | 54.3% |
| 5004764 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.72 | 53.0 | 5.42e-01 | 100.0% | 84.4% |
| 5031362 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.72 | 53.0 | 4.93e-01 | 100.0% | 63.3% |
| 4936825 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.71 | 48.0 | 4.79e-01 | 95.8% | 68.0% |
| 5074248 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.71 | 52.0 | 5.03e-01 | 100.0% | 69.1% |
| 4929551 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.71 | 52.0 | 4.80e-01 | 100.0% | 60.0% |
| 5065458 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.71 | 52.0 | 4.84e-01 | 100.0% | 63.3% |
| 5065699 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.71 | 52.0 | 5.39e-01 | 100.0% | 86.7% |
| 5071519 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.71 | 51.0 | 4.69e-01 | 100.0% | 58.5% |
| 4966249 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.70 | 51.0 | 5.30e-01 | 100.0% | 84.4% |
| 5029188 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.70 | 51.0 | 4.90e-01 | 100.0% | 69.1% |
| 5072446 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.70 | 51.0 | 4.78e-01 | 100.0% | 63.3% |
| 4967853 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.70 | 51.0 | 4.90e-01 | 100.0% | 69.1% |
| 5031928 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.69 | 51.0 | 4.93e-01 | 100.0% | 70.9% |
| 4955560 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.69 | 51.0 | 4.95e-01 | 100.0% | 70.9% |
| 4928755 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 54.0 | 5.17e-01 | 95.8% | 78.3% |
| 4639978 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 50.0 | 4.87e-01 | 100.0% | 70.9% |
| 5076168 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.68 | 49.0 | 4.15e-01 | 100.0% | 44.7% |
| 5031005 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 49.0 | 4.77e-01 | 100.0% | 69.1% |
| 4967881 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 50.0 | 4.87e-01 | 100.0% | 72.2% |
| 4993775 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 50.0 | 4.88e-01 | 100.0% | 70.9% |
| 5058522 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 50.0 | 4.78e-01 | 100.0% | 67.2% |
| 5014382 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.68 | 50.0 | 4.38e-01 | 100.0% | 52.0% |
| 352168 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.67 | 48.0 | 4.64e-01 | 100.0% | 67.3% |
| 4941025 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.67 | 51.0 | 5.12e-01 | 100.0% | 83.7% |
| 5031215 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.67 | 50.0 | 4.79e-01 | 100.0% | 70.9% |
| 5065651 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.67 | 49.0 | 4.79e-01 | 100.0% | 70.9% |
| 5027722 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.67 | 52.0 | 5.37e-01 | 100.0% | 93.3% |
| 4955687 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.67 | 48.0 | 4.75e-01 | 100.0% | 71.7% |
| 5032935 | 304.8.1.112 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › MazE_antitoxin | 0.67 | 50.0 | 3.72e-01 | 100.0% | 30.4% |
| 5030593 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.67 | 50.0 | 4.79e-01 | 100.0% | 70.9% |
| 4967811 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.67 | 48.0 | 4.54e-01 | 100.0% | 63.3% |
| 4937994 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.67 | 48.0 | 5.04e-01 | 100.0% | 95.0% |
| 4966339 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.67 | 49.0 | 4.66e-01 | 100.0% | 65.0% |
| 5059101 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 51.0 | 5.29e-01 | 100.0% | 93.3% |
| 5073677 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.66 | 48.0 | 4.70e-01 | 100.0% | 70.9% |
| 4992345 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.66 | 49.0 | 5.04e-01 | 100.0% | 86.7% |
| 3984485 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 51.0 | 4.35e-01 | 100.0% | 51.2% |
| 5040491 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 49.0 | 4.40e-01 | 100.0% | 55.7% |
| 4993343 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.66 | 51.0 | 5.22e-01 | 100.0% | 91.1% |
| 4982519 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 48.0 | 4.76e-01 | 100.0% | 76.0% |
| 4993826 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.66 | 50.0 | 5.06e-01 | 100.0% | 85.4% |
| 4005331 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.66 | 50.0 | 4.99e-01 | 100.0% | 82.0% |
| 4967502 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.65 | 47.0 | 4.85e-01 | 100.0% | 84.4% |
| 4992541 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 50.0 | 4.58e-01 | 100.0% | 63.1% |
| 5059683 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 48.0 | 4.75e-01 | 100.0% | 78.0% |
| 5079669 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 48.0 | 4.62e-01 | 100.0% | 70.9% |
| 4934807 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 48.0 | 4.20e-01 | 100.0% | 52.0% |
| 5032072 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 47.0 | 4.58e-01 | 100.0% | 70.9% |
| 4991158 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.64 | 49.0 | 5.02e-01 | 97.9% | 91.1% |
| 5079277 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.64 | 46.0 | 4.41e-01 | 100.0% | 65.5% |
| 5035358 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.64 | 51.0 | 4.99e-01 | 100.0% | 90.9% |
| 4991794 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.64 | 50.0 | 5.03e-01 | 100.0% | 86.0% |
| 5001623 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.64 | 49.0 | 4.88e-01 | 100.0% | 84.0% |
| 5027264 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.64 | 47.0 | 4.20e-01 | 100.0% | 55.7% |
| 5032296 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.64 | 47.0 | 4.59e-01 | 100.0% | 70.9% |
| 4930879 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.64 | 50.0 | 4.95e-01 | 100.0% | 86.0% |
| 4969278 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.64 | 46.0 | 4.70e-01 | 100.0% | 84.4% |
| 5001967 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.63 | 48.0 | 4.83e-01 | 100.0% | 84.0% |
| 4085449 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.63 | 49.0 | 4.30e-01 | 100.0% | 56.0% |
| 5031674 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.63 | 46.0 | 4.49e-01 | 100.0% | 70.9% |
| 5073296 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.63 | 50.0 | 5.00e-01 | 100.0% | 90.0% |
| 5058860 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.63 | 46.0 | 4.47e-01 | 100.0% | 70.9% |
| 5060420 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.63 | 48.0 | 4.92e-01 | 100.0% | 93.3% |
| 5073758 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.62 | 45.0 | 4.60e-01 | 100.0% | 84.4% |
| 3503896 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 48.0 | 4.96e-01 | 100.0% | 93.3% |
| 3038102 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.62 | 51.0 | 4.92e-01 | 100.0% | 91.1% |
| 4933873 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 48.0 | 4.66e-01 | 100.0% | 78.2% |
| 5057441 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 49.0 | 5.06e-01 | 100.0% | 97.8% |
| 4959387 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 48.0 | 4.97e-01 | 100.0% | 93.3% |
| 1104928 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.61 | 48.0 | 4.20e-01 | 100.0% | 56.0% |
| 4992628 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.61 | 45.0 | 4.35e-01 | 100.0% | 70.9% |
| 4961292 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.61 | 41.0 | 3.65e-01 | 100.0% | 46.7% |
| 5055291 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.60 | 46.0 | 4.50e-01 | 100.0% | 86.7% |
| 3711293 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 39.0 | 3.63e-01 | 70.8% | 55.4% |
| 4977171 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.57 | 47.0 | 4.63e-01 | 100.0% | 90.7% |
| 3326674 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.57 | 45.0 | 4.39e-01 | 100.0% | 83.6% |
| 4992409 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.55 | 42.0 | 4.30e-01 | 100.0% | 93.3% |
| 3578203 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.54 | 39.0 | 2.88e-01 | 81.2% | 58.7% |
| 3484326 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.51 | 43.0 | 2.69e-01 | 100.0% | 16.7% |