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NC_041872.1__YP_009594071.1__FDG89_gp15__00015
Bact-VirNC_041872.1__YP_009594071.1__FDG89_gp15__00015
Identity
- Accession:
- NC_041872 ↗
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Taxonomy
TaxID: 1740108
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-146
Domain cluster:
rep: NC_021798.1__YP_008241560.1__Phi17-2_gp065__00065__D5-182
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jzjA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 37.0 | 3.27e-01 | 74.4% | 92.7% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 25.0 | 3.44e-01 | 99.2% | 98.3% |
D2
medium
residues 171-277
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4z3xA03 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.52 | 45.0 | 3.85e-01 | 100.0% | 86.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4163672 | 502.1.1.1 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C | 0.94 | 49.0 | 6.10e-01 | 97.2% | 80.0% |
| 4485228 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 62.0 | 4.21e-01 | 99.1% | 79.7% |
| 4452602 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 62.0 | 4.24e-01 | 100.0% | 82.3% |
| 3290637 | 109.3.1.158 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF1266 | 0.52 | 41.0 | 3.25e-01 | 85.0% | 65.1% |