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NC_041872.1__YP_009594091.1__FDG89_gp35__00035

Bact-Vir

NC_041872.1__YP_009594091.1__FDG89_gp35__00035

Identity

Accession:
NC_041872 ↗
Kingdom:
phage

Quality

84.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Fipvunavirus› Flavobacterium_phage_FpV4

TaxID: 1740108

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 56-116_179-214
PDB
Domain cluster: rep: IMGVR_UViG_3300031280_000001-3300031280-Ga0307428_100016470__D50-106_171-210
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gioA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 4.08e-01 100.0% 82.3%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 3.75e-01 99.0% 72.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4977778 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 35.0 3.33e-01 99.0% 54.8%
D2 high residues 127-170
PDB
Domain cluster: representative
CATH (77)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.83 74.0 4.96e-01 100.0% 38.7%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.80 56.0 4.02e-01 100.0% 26.0%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.79 56.0 4.04e-01 100.0% 26.4%
1af6A00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.78 67.0 3.84e-01 100.0% 20.4%
1tluA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.77 52.0 3.78e-01 70.5% 26.5%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.75 66.0 4.59e-01 100.0% 42.6%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.74 60.0 4.22e-01 100.0% 29.0%
7snsB01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.73 57.0 3.91e-01 100.0% 24.1%
5jmfA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.72 64.0 3.88e-01 100.0% 55.0%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.72 55.0 3.86e-01 97.7% 27.4%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.70 61.0 4.34e-01 100.0% 35.0%
3r87A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.70 61.0 4.35e-01 97.7% 80.3%
4fnvA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.69 60.0 3.63e-01 100.0% 54.3%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.69 54.0 4.33e-01 97.7% 43.3%
2ov9C01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.69 57.0 4.05e-01 97.7% 65.3%
2oiwA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.68 58.0 4.14e-01 97.7% 76.7%
3f1tB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.68 55.0 3.99e-01 95.5% 74.3%
2qqpA03 2.60.40.4260 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 58.0 4.15e-01 100.0% 39.4%
3hm0A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.67 57.0 4.15e-01 97.7% 86.5%
3tp4B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 45.0 3.62e-01 70.5% 63.4%
4gakA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.67 57.0 3.59e-01 100.0% 56.0%
3rd7A00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.67 55.0 3.43e-01 97.7% 37.1%
2cyeC00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.67 56.0 4.07e-01 97.7% 76.5%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.67 58.0 4.53e-01 97.7% 49.5%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.67 49.0 4.13e-01 90.9% 46.1%
3lrkA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.67 56.0 3.96e-01 100.0% 95.9%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 58.0 4.13e-01 100.0% 43.3%
2yt4A03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 49.0 3.80e-01 93.2% 34.6%
3b7kC02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.66 55.0 4.20e-01 97.7% 96.4%
3cygA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.66 55.0 4.14e-01 100.0% 80.7%
2qwzA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.66 54.0 3.90e-01 95.5% 74.4%
2oafB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.66 55.0 3.91e-01 97.7% 75.0%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.66 45.0 3.45e-01 72.7% 31.7%
1njkA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.66 55.0 3.97e-01 97.7% 79.7%
3uoaB02 2.60.40.3360 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 48.0 3.51e-01 81.8% 55.9%
3b77A01 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.66 47.0 3.60e-01 100.0% 34.0%
4aqzA00 2.60.40.3470 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 44.0 3.14e-01 70.5% 73.9%
1c8uA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.65 52.0 3.68e-01 95.5% 65.4%
3e29B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.65 52.0 3.83e-01 95.5% 72.4%
4ae8D00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 52.0 3.60e-01 95.5% 58.2%
3lw3B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 52.0 3.76e-01 95.5% 67.2%
1pn2D02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 54.0 3.97e-01 97.7% 85.5%
3ir3A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 53.0 3.92e-01 97.7% 88.1%
3dkzA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 52.0 3.85e-01 97.7% 76.8%
6c98A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 46.0 3.70e-01 79.5% 74.7%
2ml5A00 3.10.450.410 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 52.0 3.62e-01 100.0% 26.5%
4w78F00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 50.0 3.80e-01 97.7% 91.3%
3kh8A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 52.0 3.79e-01 97.7% 83.5%
2hboA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 52.0 3.79e-01 97.7% 69.2%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 54.0 3.87e-01 100.0% 44.4%
3ci0I00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.63 52.0 4.32e-01 97.7% 59.0%
2egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 52.0 3.87e-01 97.7% 83.3%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.62 54.0 3.36e-01 100.0% 86.3%
3mnmA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.62 52.0 3.93e-01 97.7% 67.9%
3bbjA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.61 51.0 3.24e-01 97.7% 35.6%
1ivyB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.61 52.0 3.00e-01 100.0% 24.4%
2m7oA00 3.10.450.400 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 0.61 45.0 3.99e-01 97.7% 52.9%
1jlcB03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.61 43.0 3.11e-01 75.0% 26.3%
3nwzB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 48.0 3.47e-01 97.7% 64.9%
1c16A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 43.0 3.47e-01 79.5% 72.2%
2essA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.59 49.0 3.88e-01 97.7% 90.9%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.59 47.0 4.67e-01 93.2% 97.9%
2g30A01 2.60.40.1150 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 46.0 3.57e-01 97.7% 65.8%
1z54A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 46.0 3.45e-01 97.7% 76.5%
1c8uA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 47.0 3.57e-01 95.5% 73.0%
3nuhB03 3.10.20.690 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 44.0 3.57e-01 100.0% 43.8%
5kvsA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.57 47.0 3.27e-01 100.0% 63.6%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.56 48.0 4.10e-01 97.7% 62.0%
2y8tA03 2.10.70.70 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.55 39.0 3.69e-01 90.9% 60.0%
3d9wA02 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.55 44.0 3.51e-01 97.7% 42.2%
4h8wC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 42.0 3.62e-01 88.6% 69.3%
2dslA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 41.0 3.29e-01 97.7% 80.9%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.54 45.0 3.42e-01 97.7% 94.7%
1vjnA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 39.0 2.72e-01 100.0% 20.1%
3u2gA02 2.60.98.40 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain 0.52 40.0 3.04e-01 95.5% 34.1%
1fu1A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.52 39.0 3.15e-01 100.0% 38.1%
1bf3A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 41.0 2.64e-01 95.5% 40.8%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4958190 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.78 67.0 4.00e-01 100.0% 58.2%
4958282 12.3.1.14 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III 0.78 67.0 3.94e-01 100.0% 58.3%
3496242 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 53.0 5.09e-01 81.8% 64.0%
3387861 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.73 61.0 4.56e-01 97.7% 38.3%
3499466 3704.1.1.0 ↗ alpha superhelices › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain › Apoptotic protease-activating factor 1 (Apaf-1) helical domain 0.73 61.0 3.22e-01 97.7% 4.2%
4668044 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.72 59.0 4.16e-01 97.7% 30.1%
4990115 318.1.1.0 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.70 51.0 4.03e-01 97.7% 36.7%
5022840 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.70 50.0 4.01e-01 97.7% 38.8%
5049477 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.70 57.0 5.15e-01 100.0% 66.7%
3459218 5.1.3.159 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7595 0.69 57.0 3.42e-01 97.7% 12.9%
3612982 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.69 60.0 4.20e-01 100.0% 38.2%
185415 3459.1.1.1 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.69 54.0 4.33e-01 97.7% 43.3%
4215371 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.69 50.0 3.95e-01 95.5% 36.7%
3839234 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.68 56.0 4.31e-01 95.5% 40.0%
4949036 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.68 57.0 5.50e-01 95.5% 96.0%
5043521 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.68 45.0 3.27e-01 70.5% 49.6%
5061086 10.1.1.35 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 0.67 57.0 3.72e-01 97.7% 46.5%
4176400 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.67 55.0 4.65e-01 97.7% 54.7%
3721374 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.67 45.0 3.47e-01 93.2% 31.0%
3181290 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.66 56.0 4.04e-01 97.7% 60.0%
5037697 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.66 56.0 3.60e-01 100.0% 23.5%
3665166 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 54.0 3.31e-01 95.5% 13.7%
3246050 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.66 52.0 4.22e-01 90.9% 45.6%
3742121 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 50.0 5.18e-01 95.5% 92.5%
4539150 719.1.1.5 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PF27933 0.66 58.0 4.08e-01 100.0% 32.6%
4488171 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.65 58.0 3.39e-01 100.0% 29.4%
3451281 71.1.1.12 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF620 0.65 55.0 3.38e-01 100.0% 18.3%
3549045 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.65 52.0 3.90e-01 88.6% 38.2%
5060010 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 40.0 4.06e-01 81.8% 62.2%
3633647 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.64 46.0 4.12e-01 95.5% 53.8%
5041378 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.63 51.0 3.62e-01 95.5% 67.3%
3705742 375.1.1.7 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.63 41.0 3.89e-01 81.8% 51.7%
3479661 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 50.0 3.79e-01 88.6% 37.3%
3925738 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 53.0 4.01e-01 95.5% 39.1%
5014541 5090.1.1.11 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S_layer_N 0.63 46.0 3.39e-01 97.7% 29.2%
3216768 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 51.0 3.96e-01 93.2% 41.9%
3374363 222.1.1.3 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl_CoA_thio 0.63 43.0 2.91e-01 81.8% 17.8%
3797523 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.63 49.0 3.59e-01 88.6% 32.3%
4614038 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.63 54.0 3.87e-01 100.0% 44.4%
3514660 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.63 49.0 3.98e-01 93.2% 44.4%
4464751 4041.1.1.0 ↗ a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase 0.62 52.0 3.57e-01 100.0% 56.5%
3970560 222.1.1.4 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.62 48.0 3.66e-01 97.7% 76.0%
3730653 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.62 50.0 4.33e-01 95.5% 58.6%
3847965 222.1.1.15 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3C 0.61 51.0 3.46e-01 97.7% 56.7%
3618439 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.61 50.0 3.97e-01 97.7% 82.0%
3797707 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 41.0 2.97e-01 88.6% 22.2%
5042471 2003.1.5.42 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 0.61 44.0 2.76e-01 88.6% 13.2%
3938972 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.61 49.0 4.20e-01 93.2% 56.0%
3994059 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.61 41.0 3.50e-01 81.8% 41.3%
3514664 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.60 48.0 4.01e-01 93.2% 50.0%
2732105 719.1.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XRCC4 0.60 50.0 4.88e-01 97.7% 87.5%
3690953 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.60 51.0 3.97e-01 100.0% 70.9%
4955420 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.60 48.0 2.99e-01 97.7% 15.2%
3337354 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.60 51.0 3.72e-01 100.0% 35.4%
3988706 243.3.1.13 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 0.60 46.0 4.06e-01 97.7% 54.3%
3399367 9.2.1.5 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7043 0.60 47.0 3.81e-01 93.2% 43.2%
3493361 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.59 41.0 3.04e-01 88.6% 26.7%
3907175 719.1.1.3 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › PAXX 0.59 45.0 3.63e-01 100.0% 40.0%
4541295 4041.1.1.1 ↗ a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.58 49.0 3.20e-01 100.0% 84.4%
4931876 11.1.1.1432 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26259 0.58 44.0 3.54e-01 86.4% 65.3%
4930528 11.1.1.1432 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26259 0.58 47.0 3.47e-01 90.9% 55.0%
3933100 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 44.0 3.90e-01 90.9% 55.7%
6098 222.1.1.16 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl-ACP_TE_C 0.58 47.0 3.75e-01 97.7% 86.7%
3593518 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.58 49.0 3.32e-01 100.0% 25.7%
5043905 3435.1.1.0 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.57 47.0 3.08e-01 100.0% 75.1%
3831169 5.1.5.66 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.57 41.0 2.61e-01 97.7% 13.1%
3408937 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 43.0 3.70e-01 93.2% 48.8%
3319893 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 43.0 3.44e-01 88.6% 39.0%
4009943 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.56 44.0 3.35e-01 95.5% 40.8%
3606532 2484.6.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR 0.56 40.0 3.26e-01 86.4% 37.8%
3706310 331.19.1.0 ↗ a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.56 45.0 3.60e-01 100.0% 54.3%
3502573 222.1.1.10 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.56 43.0 3.42e-01 95.5% 79.1%
3195088 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.55 47.0 2.63e-01 97.7% 35.4%
3716204 220.1.1.11 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru 0.55 47.0 3.53e-01 100.0% 41.7%
3832602 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.55 43.0 3.40e-01 100.0% 38.2%
4228328 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.54 46.0 3.76e-01 100.0% 51.2%
3788141 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 41.0 3.61e-01 90.9% 56.0%
5058595 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 42.0 2.60e-01 100.0% 30.7%
3739414 330.1.1.3 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer 0.52 41.0 3.29e-01 100.0% 50.5%
D3 medium residues 1-55
PDB
Domain cluster: representative