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NC_041872.1__YP_009594109.1__FDG89_gp53__00053

Bact-Vir

NC_041872.1__YP_009594109.1__FDG89_gp53__00053

Identity

Accession:
NC_041872 ↗
Kingdom:
phage

Quality

74.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-77
PDB
CATH (95)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kanA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.81 74.0 7.27e-01 100.0% 97.3%
1wj4A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.79 70.0 6.60e-01 100.0% 90.4%
6jl3A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.77 70.0 6.91e-01 100.0% 95.9%
2dziA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.77 70.0 6.62e-01 100.0% 87.7%
4b6wA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.77 67.0 6.31e-01 100.0% 93.0%
2jx5A00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.76 62.0 6.21e-01 100.0% 88.4%
3rpfC00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.76 66.0 6.56e-01 98.6% 93.1%
1t0yA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.76 67.0 6.19e-01 100.0% 88.9%
7sbiB01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.76 69.0 6.70e-01 100.0% 100.0%
7pyvC02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.76 67.0 6.73e-01 97.1% 98.6%
1wspA00 2.40.240.130 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › 0.76 69.0 6.47e-01 100.0% 94.0%
7sbiA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.76 69.0 6.88e-01 100.0% 100.0%
2kjrA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.75 65.0 6.27e-01 100.0% 98.8%
2bkfA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.75 67.0 6.34e-01 100.0% 96.4%
2fazA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.75 67.0 6.52e-01 100.0% 94.8%
1yn3A00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.75 66.0 5.90e-01 98.6% 96.9%
4hwiB01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.75 68.0 6.78e-01 100.0% 98.6%
2bwfA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.75 67.0 6.48e-01 100.0% 90.9%
3rt3B01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.75 67.0 6.56e-01 100.0% 97.3%
2fnjB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.75 67.0 5.97e-01 100.0% 85.7%
1v6eA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.75 65.0 6.28e-01 100.0% 98.8%
2c7hA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.75 66.0 6.18e-01 100.0% 84.9%
1z2mA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.74 66.0 6.41e-01 100.0% 92.2%
1wmhA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.74 66.0 6.27e-01 100.0% 98.8%
1ef1A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.74 66.0 6.34e-01 100.0% 98.7%
1wmhB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.74 66.0 6.25e-01 100.0% 96.3%
1oeyA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.74 66.0 6.28e-01 100.0% 93.9%
1m94A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.74 66.0 6.55e-01 100.0% 97.3%
2gbmA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.74 66.0 6.25e-01 100.0% 97.5%
6kykA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.74 65.0 6.16e-01 100.0% 100.0%
1wx8A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.74 67.0 5.94e-01 100.0% 74.0%
2kmcA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.73 64.0 5.70e-01 100.0% 79.4%
2kd0A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.73 65.0 6.52e-01 100.0% 98.6%
3m62B00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.73 65.0 6.48e-01 98.6% 97.2%
2l52A00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.73 64.0 5.74e-01 100.0% 90.9%
1se9A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.73 65.0 5.76e-01 100.0% 84.2%
3goeA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.73 64.0 6.18e-01 100.0% 90.0%
2al3A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.73 64.0 6.26e-01 100.0% 93.4%
2jxxA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.73 65.0 6.24e-01 100.0% 92.3%
2dzmA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.73 63.0 6.30e-01 98.6% 97.2%
1v86A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.73 65.0 5.84e-01 100.0% 72.6%
1wggA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.73 64.0 6.35e-01 100.0% 95.9%
1wjnA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.73 63.0 5.69e-01 100.0% 85.6%
5ffiE00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.73 63.0 5.60e-01 98.6% 100.0%
4kdiD00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.72 64.0 6.29e-01 98.6% 97.3%
1euvB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.72 65.0 6.26e-01 100.0% 88.6%
2k9xA00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.72 64.0 5.62e-01 100.0% 91.2%
3qa8G02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.72 63.0 6.10e-01 100.0% 93.7%
6djwA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.72 64.0 6.32e-01 100.0% 98.6%
1v5tA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.72 63.0 5.83e-01 100.0% 82.2%
2mlbA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.71 63.0 6.06e-01 100.0% 89.9%
1wf9A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.71 63.0 5.46e-01 100.0% 80.4%
4efoA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.71 63.0 5.81e-01 100.0% 84.3%
1zud400 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.71 57.0 5.79e-01 100.0% 92.4%
2c60A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.71 63.0 6.03e-01 100.0% 98.7%
3w1sC00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.70 63.0 6.11e-01 100.0% 93.4%
3cwiA00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.70 58.0 5.86e-01 98.6% 92.6%
2dafA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.70 62.0 6.01e-01 100.0% 97.4%
3p42A01 3.10.20.700 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.70 62.0 5.69e-01 100.0% 85.6%
3tcaA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.70 61.0 5.66e-01 100.0% 91.1%
3vqiD03 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.69 61.0 5.96e-01 98.6% 97.3%
2incC00 3.10.20.270 Alpha Beta › Roll › Ubiquitin-like (UB roll) › TmoB-like 0.69 61.0 5.75e-01 100.0% 96.4%
3w1yB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.69 62.0 5.38e-01 100.0% 73.1%
1mhxA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.69 52.0 5.42e-01 100.0% 86.2%
2wxfA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.69 60.0 5.09e-01 100.0% 73.9%
2kl0A00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.69 54.0 5.40e-01 100.0% 83.6%
4bfrB02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.69 59.0 4.92e-01 100.0% 64.1%
7bi2A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.69 60.0 5.23e-01 100.0% 76.6%
1a70A00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.68 60.0 5.41e-01 100.0% 91.8%
2zeqA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.68 59.0 5.74e-01 100.0% 91.0%
2ekiA00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.68 60.0 5.45e-01 100.0% 80.6%
1e7uA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.68 60.0 4.54e-01 100.0% 47.3%
2y3aA01 3.10.20.770 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.68 59.0 3.97e-01 100.0% 29.3%
4hpmD00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.68 58.0 5.59e-01 100.0% 93.9%
2y5pA00 2.60.40.4270 Mainly Beta › Sandwich › Immunoglobulin-like › Listeria-Bacteroides repeat domain 0.68 58.0 5.78e-01 100.0% 91.7%
3dadA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.67 57.0 3.77e-01 100.0% 29.6%
4d2kB00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.67 59.0 5.64e-01 100.0% 91.3%
1j0gA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.67 57.0 5.30e-01 100.0% 81.5%
5xbfA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.67 58.0 5.45e-01 100.0% 100.0%
1wfyA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.66 56.0 5.55e-01 98.6% 97.2%
6larC01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.66 56.0 5.71e-01 100.0% 100.0%
1zxhA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.65 47.0 5.08e-01 100.0% 98.2%
4tq1A02 3.10.20.620 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.65 56.0 5.16e-01 100.0% 86.8%
2cu3B00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.64 49.0 5.05e-01 97.1% 92.1%
2l76A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.64 55.0 5.06e-01 100.0% 73.7%
1wxqA03 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.64 55.0 5.46e-01 100.0% 97.2%
2e1qC01 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.63 55.0 5.07e-01 100.0% 91.3%
2cs4A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 54.0 4.96e-01 100.0% 83.2%
3au4A02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 53.0 4.87e-01 100.0% 94.7%
6vfrA01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.62 46.0 4.07e-01 81.2% 82.9%
2uwqA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.61 51.0 4.84e-01 100.0% 91.9%
1d4bA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.61 51.0 4.31e-01 100.0% 54.9%
1k8rB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.60 52.0 4.97e-01 100.0% 86.6%
1jroA01 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.57 47.0 4.58e-01 100.0% 96.2%
3i57A01 3.10.20.470 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.54 47.0 4.58e-01 100.0% 96.0%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4144355 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.83 76.0 7.38e-01 100.0% 97.3%
3999476 221.1.1.5 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DIX 0.81 74.0 6.61e-01 100.0% 84.2%
169602 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.81 74.0 6.85e-01 100.0% 83.5%
3847728 221.1.1.7 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.80 72.0 6.34e-01 100.0% 75.0%
4024759 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.79 72.0 7.05e-01 100.0% 94.7%
3753492 221.1.1.7 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.79 71.0 6.42e-01 100.0% 79.8%
4339397 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.79 69.0 6.69e-01 98.6% 86.7%
3254182 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.79 71.0 6.96e-01 100.0% 96.0%
3572229 221.1.1.7 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.79 70.0 5.62e-01 100.0% 55.6%
3833546 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.78 70.0 6.45e-01 100.0% 83.3%
3694613 221.1.1.7 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.78 70.0 6.42e-01 100.0% 82.2%
4029917 221.1.1.41 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UN_NPL4 0.78 71.0 6.74e-01 100.0% 92.5%
3448485 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.78 70.0 6.53e-01 100.0% 83.5%
3738341 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.78 70.0 6.56e-01 100.0% 84.7%
4011310 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.78 69.0 6.77e-01 98.6% 97.3%
3527416 221.1.1.52 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 0.77 69.0 6.24e-01 100.0% 83.0%
989266 221.1.1.7 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.77 68.0 6.58e-01 98.6% 94.9%
3595875 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.77 68.0 6.14e-01 98.6% 96.8%
3322600 221.1.1.4 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 0.77 69.0 6.44e-01 100.0% 95.3%
3300453 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.77 69.0 6.78e-01 100.0% 93.3%
3510573 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.77 69.0 6.47e-01 100.0% 82.4%
3509787 221.1.1.7 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.77 68.0 5.76e-01 100.0% 65.2%
3889375 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.76 68.0 6.41e-01 100.0% 96.4%
3462768 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.76 70.0 5.83e-01 100.0% 60.9%
3709956 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.76 68.0 6.73e-01 100.0% 98.6%
4683343 221.1.4.0 a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like 0.76 68.0 6.49e-01 100.0% 86.3%
3322127 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.76 69.0 6.40e-01 100.0% 83.5%
3332203 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.76 69.0 6.32e-01 100.0% 77.8%
3626149 221.1.1.7 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.76 67.0 5.36e-01 100.0% 52.1%
3273867 221.1.1.4 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 0.76 68.0 6.36e-01 100.0% 90.6%
3762141 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.76 69.0 6.16e-01 100.0% 72.6%
3585728 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.76 69.0 6.43e-01 100.0% 82.4%
3404934 221.1.1.52 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 0.76 67.0 6.10e-01 100.0% 84.0%
3225042 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.76 68.0 6.35e-01 100.0% 82.4%
3291979 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.76 69.0 6.04e-01 100.0% 70.0%
3237321 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.76 67.0 5.95e-01 100.0% 71.0%
3994191 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.76 68.0 6.32e-01 100.0% 94.1%
3458794 221.1.1.44 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD 0.76 68.0 6.81e-01 100.0% 100.0%
3834654 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.76 69.0 6.38e-01 100.0% 82.4%
2813508 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.75 68.0 6.61e-01 100.0% 92.1%
3463286 221.1.1.4 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 0.75 67.0 5.95e-01 100.0% 95.0%
3814682 221.1.1.44 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD 0.75 67.0 5.93e-01 100.0% 73.0%
3251372 221.1.1.70 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › OTU1_UBXL 0.75 67.0 6.38e-01 100.0% 92.5%
3554129 221.1.1.41 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UN_NPL4 0.75 67.0 6.41e-01 100.0% 93.8%
3628427 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.75 66.0 6.35e-01 100.0% 96.2%
3849617 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.75 68.0 5.85e-01 100.0% 80.0%
3496021 221.1.1.7 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.75 67.0 4.95e-01 100.0% 41.7%
3460512 221.1.1.33 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DWNN 0.75 67.0 6.02e-01 100.0% 84.2%
4982816 221.1.1.75 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › SAMP2 0.75 62.0 6.28e-01 100.0% 92.8%
3409042 221.1.1.41 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UN_NPL4 0.75 67.0 6.26e-01 100.0% 84.7%
3408070 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.74 67.0 6.54e-01 100.0% 93.3%
3306863 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.74 67.0 6.00e-01 100.0% 84.2%
3269919 221.1.1.44 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD 0.74 67.0 6.52e-01 100.0% 92.0%
4018064 221.1.1.44 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD 0.74 66.0 6.34e-01 100.0% 92.5%
3739205 221.1.1.70 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › OTU1_UBXL 0.74 64.0 6.29e-01 97.1% 96.0%
3307682 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.74 67.0 6.36e-01 100.0% 88.7%
3894583 221.1.1.33 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DWNN 0.74 66.0 5.95e-01 100.0% 74.7%
4878029 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.74 66.0 5.77e-01 100.0% 80.8%
3270496 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.74 66.0 6.44e-01 100.0% 94.7%
3409333 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.74 65.0 6.50e-01 100.0% 95.7%
3753480 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.74 65.0 5.89e-01 100.0% 74.7%
6152 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.74 67.0 6.26e-01 100.0% 85.5%
3204628 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.74 66.0 5.80e-01 100.0% 76.0%
3788907 221.1.1.52 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 0.73 64.0 5.66e-01 100.0% 86.7%
3737458 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.73 65.0 6.23e-01 100.0% 85.0%
6134 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.73 65.0 5.84e-01 100.0% 72.6%
3475876 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.73 65.0 5.97e-01 100.0% 83.3%
3893358 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.73 64.0 6.45e-01 98.6% 98.6%
4938318 221.1.1.14 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS 0.72 60.0 6.21e-01 100.0% 100.0%
3224225 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.72 62.0 5.89e-01 100.0% 88.2%
3165151 221.1.4.1 a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like › SLBB 0.71 63.0 6.05e-01 100.0% 87.5%
3814403 221.1.4.4 a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like › Ubiq_DUF_assoc 0.71 64.0 6.14e-01 100.0% 97.5%
4095700 221.1.1.14 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS 0.71 56.0 5.92e-01 98.6% 100.0%
3997558 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.71 63.0 6.02e-01 100.0% 86.3%
3900526 221.1.1.12 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RBD 0.71 62.0 5.94e-01 100.0% 88.7%
3926235 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.71 64.0 6.14e-01 100.0% 100.0%
3227571 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.71 62.0 5.98e-01 100.0% 95.0%
3726602 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.70 60.0 5.66e-01 97.1% 84.7%
3414328 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.70 61.0 5.96e-01 100.0% 93.3%
3709652 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.70 61.0 6.11e-01 100.0% 95.7%
3935777 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.70 61.0 5.88e-01 100.0% 95.0%
3250300 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.69 61.0 5.94e-01 100.0% 100.0%
3882461 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.69 59.0 5.85e-01 100.0% 94.7%
3606623 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.69 60.0 5.98e-01 100.0% 95.7%
3330193 221.1.1.44 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD 0.69 61.0 5.41e-01 100.0% 70.0%
3414356 221.1.1.12 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RBD 0.69 59.0 5.88e-01 98.6% 98.6%
3403133 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.68 61.0 5.39e-01 100.0% 70.0%
3275839 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.68 60.0 5.46e-01 100.0% 82.1%
3483645 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.68 59.0 5.65e-01 100.0% 98.8%
3245195 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.68 59.0 5.68e-01 100.0% 90.0%
4230546 221.1.1.44 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Rad60-SLD 0.68 59.0 5.45e-01 100.0% 77.8%
3262418 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.68 59.0 5.89e-01 100.0% 97.1%
3993535 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.67 58.0 5.63e-01 100.0% 98.8%
4577794 221.1.4.3 a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like › SLBB_2 0.67 58.0 5.31e-01 100.0% 82.1%
4441863 221.1.1.109 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Sde2_N_Ubi_vert 0.67 55.0 5.56e-01 100.0% 92.9%
4426469 221.1.4.0 a+b two layers › beta-Grasp › Ubiquitin-related › Nqo1 middle domain-like 0.67 57.0 5.29e-01 98.6% 85.6%
3619801 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.67 57.0 5.64e-01 100.0% 97.3%
3220610 221.1.1.202 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF30122 0.67 59.0 5.31e-01 100.0% 96.8%
3533173 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.66 57.0 5.48e-01 98.6% 97.5%
3257157 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.64 54.0 5.40e-01 100.0% 95.7%
D2 high residues 91-133
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r71A02 6.10.250.140 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.76 59.0 5.37e-01 100.0% 63.8%
1zk8A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 45.0 4.42e-01 100.0% 58.7%
5h3hB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.71 52.0 3.16e-01 79.1% 32.3%
3qvmB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.69 48.0 2.95e-01 76.7% 30.7%
1a8uA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.69 48.0 2.96e-01 76.7% 33.6%
2x1dA02 1.10.10.2120 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 58.0 4.87e-01 100.0% 58.1%
4fjqA02 1.50.10.130 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain 0.65 45.0 3.09e-01 76.7% 21.0%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 43.0 4.21e-01 100.0% 63.8%
2dodA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.59 40.0 3.27e-01 72.1% 57.3%
3ajmA01 1.10.12.70 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › 0.56 45.0 4.22e-01 100.0% 82.8%
5mmjn01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 43.0 3.41e-01 86.0% 76.4%
4wbyA02 1.10.3090.10 Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 0.55 45.0 2.93e-01 100.0% 44.1%
2klqA00 1.20.58.870 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 40.0 3.00e-01 90.7% 29.8%
4k35A04 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.55 36.0 3.49e-01 72.1% 54.0%
3cdlA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.54 43.0 3.97e-01 88.4% 68.5%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.81e-01 88.4% 78.6%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3353117 3722.1.1.1 alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 0.73 61.0 3.73e-01 100.0% 14.3%
417092 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.69 48.0 2.95e-01 76.7% 30.7%
3390239 3525.1.1.0 alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain 0.65 51.0 4.71e-01 100.0% 90.8%
5012832 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.64 56.0 4.42e-01 100.0% 74.4%
3789293 189.1.1.2 alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP 0.61 48.0 3.10e-01 86.0% 19.0%
3816099 5054.1.1.17 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TRAM_LAG1_CLN8 0.61 41.0 2.52e-01 81.4% 10.7%
4034210 632.2.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.54 41.0 3.80e-01 100.0% 85.7%
4452388 101.35.1.4 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.53 41.0 3.96e-01 86.0% 82.0%
4136884 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.51 40.0 2.67e-01 100.0% 32.3%