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NC_041872.1__YP_009594130.1__FDG89_gp74__00074

Bact-Vir

NC_041872.1__YP_009594130.1__FDG89_gp74__00074

Identity

Accession:
NC_041872 ↗
Kingdom:
phage

Quality

66.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Fipvunavirus› Flavobacterium_phage_FpV4

TaxID: 1740108

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-100
PDB
Domain cluster: rep: KC821625.1__AGO49061.1__Phi13-1_gp050__00050__D38-91
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zuoA08 2.30.30.620 Mainly Beta › Roll › SH3 type barrels. › 0.71 38.0 4.02e-01 81.2% 56.9%
5z0uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 47.0 3.89e-01 93.8% 56.5%
4tpuA02 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.55 32.0 3.91e-01 92.2% 100.0%
3qfgA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 42.0 3.39e-01 93.8% 49.7%
4kbxA01 2.40.37.30 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › 0.53 36.0 2.56e-01 71.9% 80.3%
2eefA01 2.60.40.2440 Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain 0.51 37.0 3.09e-01 79.7% 48.0%
3b8fB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.51 36.0 2.89e-01 76.6% 97.9%
2ba1D01 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.51 40.0 2.91e-01 96.9% 59.6%
2zuvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 35.0 3.00e-01 73.4% 80.2%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3483145 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 47.0 3.33e-01 79.7% 22.4%
3271769 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 47.0 4.18e-01 92.2% 53.7%
3893618 11.1.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.64 40.0 3.10e-01 78.1% 26.5%
4800664 12.1.1.28 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_106 0.60 37.0 3.98e-01 76.6% 74.1%
4958612 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 39.0 4.13e-01 76.6% 94.5%
5057274 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 34.0 3.20e-01 78.1% 45.9%
5068907 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 34.0 3.94e-01 78.1% 93.3%
3884573 11.1.1.318 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL3Rb_N 0.53 40.0 3.67e-01 85.9% 60.0%
3575737 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 42.0 3.85e-01 92.2% 73.3%
3933540 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 41.0 3.37e-01 92.2% 48.1%
3472025 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.51 37.0 3.21e-01 79.7% 46.4%
3184022 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.51 38.0 3.05e-01 81.2% 58.5%