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NC_041877.1__YP_009594438.1__FDG94_gp027__00027

Bact-Vir

NC_041877.1__YP_009594438.1__FDG94_gp027__00027

Identity

Accession:
NC_041877 ↗
Kingdom:
phage

Quality

84.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Samunavirus› Pseudomonas_phage_SM1

TaxID: 1772332

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-170
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lb6D02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 32.0 4.07e-01 74.4% 90.2%
4f80A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 30.0 3.84e-01 74.4% 83.9%
2bc4A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 31.0 3.74e-01 74.4% 77.1%
5eh1A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 32.0 3.83e-01 100.0% 91.5%
3bwsA01 2.60.40.3070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 28.0 3.68e-01 93.5% 97.6%
4liqE05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 28.0 3.51e-01 73.8% 87.0%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.51 30.0 3.40e-01 75.0% 78.3%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4363782 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.58 29.0 3.78e-01 99.4% 84.2%
3541719 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.58 31.0 3.54e-01 100.0% 67.2%
3903805 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.58 31.0 4.02e-01 100.0% 98.8%
3915523 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.56 32.0 3.48e-01 99.4% 65.9%
138581 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.56 29.0 3.57e-01 100.0% 80.4%
4943962 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 31.0 3.87e-01 76.2% 89.5%
3903568 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 28.0 3.51e-01 75.0% 86.0%
4258528 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 33.0 3.58e-01 92.3% 73.1%
3893912 11.1.4.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CBM_20 0.52 31.0 3.82e-01 93.5% 100.0%
3214341 10.32.1.207 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_ELAPOR1-like_3rd 0.52 31.0 3.16e-01 74.4% 58.2%
3591504 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 27.0 3.44e-01 74.4% 87.4%
3473345 11.1.1.44 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 0.51 29.0 3.30e-01 74.4% 71.5%
4992169 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 31.0 3.61e-01 73.8% 85.7%