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NC_041878.1__YP_009594938.1__FDG95_gp581__00398
Bact-VirNC_041878.1__YP_009594938.1__FDG95_gp581__00398
Identity
- Accession:
- NC_041878 ↗
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Taxonomy
TaxID: 2772511
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-145
Domain cluster:
rep: OP292654.1__UYE98818.1__XbC2_392__00389__D7-112
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6gh3A01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.69 | 49.0 | 3.62e-01 | 72.7% | 92.9% |
| 2eabB01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.63 | 44.0 | 3.54e-01 | 70.5% | 88.7% |
| 8ornD01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.60 | 43.0 | 3.88e-01 | 88.6% | 54.5% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.59 | 44.0 | 4.72e-01 | 87.1% | 89.5% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.58 | 42.0 | 4.61e-01 | 96.2% | 91.5% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 35.0 | 3.58e-01 | 93.2% | 61.7% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.57 | 43.0 | 4.61e-01 | 99.2% | 92.9% |
| 4azpA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 35.0 | 3.53e-01 | 73.5% | 61.2% |
| 6eotD01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.55 | 41.0 | 2.81e-01 | 78.0% | 54.7% |
| 6fopA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.55 | 39.0 | 3.29e-01 | 73.5% | 87.6% |
| 4q1vA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.53 | 43.0 | 3.03e-01 | 87.1% | 44.0% |
| 7bysA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 46.0 | 3.60e-01 | 97.0% | 82.3% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 37.0 | 3.79e-01 | 92.4% | 76.4% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 36.0 | 3.63e-01 | 73.5% | 69.6% |
| 3ijtB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 39.0 | 3.88e-01 | 94.7% | 74.8% |
| 8adlB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 45.0 | 3.46e-01 | 97.0% | 74.5% |
| 7d8gA01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.51 | 43.0 | 3.97e-01 | 90.2% | 100.0% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.51 | 30.0 | 3.36e-01 | 93.2% | 73.5% |
| 3p24A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 43.0 | 4.15e-01 | 91.7% | 88.2% |
| 1e5tA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.51 | 39.0 | 2.97e-01 | 84.1% | 45.9% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.50 | 36.0 | 3.94e-01 | 96.2% | 89.9% |
| 1yr2A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.50 | 40.0 | 3.05e-01 | 86.4% | 49.2% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5014253 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 34.0 | 4.55e-01 | 71.2% | 98.6% |
| 4404709 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.59 | 42.0 | 3.78e-01 | 88.6% | 54.3% |
| 1063578 | 9.2.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin | 0.59 | 42.0 | 4.65e-01 | 96.2% | 91.5% |
| 3415735 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.58 | 36.0 | 4.15e-01 | 89.4% | 85.3% |
| 3199793 | 5.1.5.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Clathrin-link | 0.58 | 50.0 | 3.68e-01 | 93.9% | 85.5% |
| 3702318 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.57 | 49.0 | 3.97e-01 | 89.4% | 93.0% |
| None | — | 0.57 | 48.0 | 3.51e-01 | 91.7% | 78.6% | |
| 3637283 | 5.1.4.441 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin-link | 0.57 | 49.0 | 3.55e-01 | 93.9% | 82.4% |
| 3645309 | 4099.1.1.27 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › DUF7806 | 0.57 | 35.0 | 4.04e-01 | 84.8% | 86.2% |
| 3793300 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 47.0 | 3.31e-01 | 91.7% | 87.2% |
| 5013018 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.56 | 44.0 | 4.47e-01 | 83.3% | 96.2% |
| 4383723 | 5087.3.1.0 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C | 0.56 | 43.0 | 3.26e-01 | 79.5% | 75.1% |
| 3225336 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 38.0 | 3.76e-01 | 84.1% | 64.1% |
| 3256681 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.55 | 42.0 | 3.04e-01 | 79.5% | 33.3% |
| 4221174 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.55 | 38.0 | 4.44e-01 | 72.0% | 98.9% |
| 3598916 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.54 | 39.0 | 3.54e-01 | 74.2% | 70.6% |
| 3265841 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.54 | 35.0 | 3.95e-01 | 91.7% | 85.0% |
| 3741655 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 47.0 | 3.45e-01 | 97.7% | 92.5% |
| 3947082 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 32.0 | 3.80e-01 | 90.9% | 87.8% |
| 3600658 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 45.0 | 3.36e-01 | 92.4% | 82.6% |
| 3282719 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.53 | 41.0 | 3.81e-01 | 81.1% | 83.6% |
| 4397238 | 12.3.1.32 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › SOGP_2nd | 0.53 | 44.0 | 3.41e-01 | 88.6% | 88.2% |
| 4963006 | 4.1.1.490 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26269 | 0.52 | 33.0 | 4.01e-01 | 93.9% | 98.8% |
| 1291144 | 9.1.1.27 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_C | 0.52 | 38.0 | 4.08e-01 | 96.2% | 87.2% |
| 3191562 | 5.1.4.229 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N | 0.51 | 44.0 | 3.15e-01 | 97.0% | 83.3% |
| 3944596 | 9.1.1.27 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF_C | 0.51 | 39.0 | 4.12e-01 | 99.2% | 90.4% |
| 4017244 | 3385.1.1.2 ↗ | beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 › PF27986 | 0.51 | 37.0 | 3.81e-01 | 89.4% | 78.4% |
| 4929336 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.51 | 40.0 | 3.85e-01 | 94.7% | 71.0% |
| 3392352 | 192.19.1.6 ↗ | alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like › eIF2A | 0.51 | 40.0 | 2.79e-01 | 84.1% | 44.7% |
| 3736626 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.51 | 35.0 | 3.58e-01 | 84.1% | 72.3% |
| 4203746 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.50 | 42.0 | 3.76e-01 | 88.6% | 89.1% |
| 3340789 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.50 | 44.0 | 3.20e-01 | 94.7% | 95.9% |
| 5038572 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.50 | 40.0 | 3.84e-01 | 95.5% | 74.7% |
| 1290096 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.50 | 38.0 | 3.30e-01 | 77.3% | 57.4% |
| 3239059 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.50 | 33.0 | 3.52e-01 | 84.8% | 73.3% |
| 2900291 | 71.1.1.11 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PNGase_F-II_N | 0.50 | 42.0 | 3.77e-01 | 89.4% | 80.2% |