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NC_041892.1__YP_009596876.1__FDH09_gp12__00012

Bact-Vir

Identity

Accession:: NC_041892 ↗
Kingdom:: phage

Quality

89.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Anatolevirus› Propionibacterium_phage_B3

TaxID: 1897533

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-182

PDB

Domain cluster: rep: IMGVR_UViG_3300005099_000002-3300005099-Ga0072682_1005676__D4-125

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4divV01	2.40.30.200	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 ›	0.65	52.0	5.38e-01	90.5%	89.8%
2rjzA02	3.30.70.60	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B	0.64	38.0	4.58e-01	89.8%	87.9%
1t7vA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.64	34.0	4.27e-01	87.1%	84.4%
3vhxF00	2.60.40.4330	Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain	0.58	29.0	3.42e-01	98.0%	67.6%
3in6A02	2.30.110.10	Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A	0.57	41.0	4.55e-01	94.6%	92.3%
3njaA02	2.10.70.100	Mainly Beta › Ribbon › Complement Module; domain 1 ›	0.54	21.0	3.14e-01	83.7%	100.0%
5yjlD01	2.30.110.10	Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A	0.53	36.0	3.71e-01	94.6%	71.8%
1fm2B03	2.30.120.10	Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region	0.52	23.0	3.23e-01	71.4%	87.9%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3964955	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.77	68.0	6.62e-01	93.9%	95.6%
3590380	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.76	68.0	6.30e-01	94.6%	82.2%
4032554	1.1.5.0 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel	0.73	62.0	5.99e-01	94.6%	80.6%
4957560	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.70	56.0	5.89e-01	92.5%	93.8%
3942090	1.1.5.77 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube	0.69	58.0	5.55e-01	94.6%	78.2%
2101633	1.1.13.1 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube	0.69	56.0	5.39e-01	94.6%	75.4%
3976188	1.1.13.1 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube	0.68	56.0	5.41e-01	94.6%	78.2%
2674670	1.1.13.6 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2	0.67	55.0	5.25e-01	94.6%	74.4%
4929634	1.1.5.47 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2	0.67	52.0	4.21e-01	96.6%	44.1%
4888726	1.1.13.6 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2	0.66	56.0	5.42e-01	94.6%	81.1%
3967003	1.1.13.35 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_11	0.61	52.0	5.32e-01	93.2%	92.9%
3535347	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.61	42.0	4.66e-01	91.8%	88.7%
3909822	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.59	40.0	4.55e-01	90.5%	91.8%
3196169	310.3.1.0 ↗	a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related	0.57	38.0	4.49e-01	80.3%	98.0%
3602859	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.54	30.0	3.66e-01	87.1%	86.7%
3439646	284.1.3.2 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C	0.53	25.0	2.87e-01	83.7%	59.0%