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NC_041911.1__YP_009598793.1__FDH28_gp100__00100
Bact-VirNC_041911.1__YP_009598793.1__FDH28_gp100__00100
Identity
- Accession:
- NC_041911 ↗
- Kingdom:
- phage
Quality
94.8
mean pLDDT
Taxonomy
TaxID: 1923889
Cluster
View cluster (20 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-140
Domain cluster:
rep: LacPavin_0818_WC45_scaffold_160996_curated_closed_complete_prodigal-single.1__X__X__00128__D36-63_76-112_128-168
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8an5A01 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.79 | 74.0 | 6.52e-01 | 99.3% | 81.8% |
| 4wqkA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.76 | 70.0 | 6.47e-01 | 99.3% | 90.3% |
| 2fclA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.75 | 69.0 | 6.63e-01 | 98.6% | 99.4% |
| 3er9B03 | 3.30.460.60 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Poxvirus poly(A) polymerase, nucleotidyltransferase domain | 0.72 | 52.0 | 5.30e-01 | 73.2% | 84.2% |
| 3b0xA03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.64 | 46.0 | 5.18e-01 | 79.7% | 97.1% |
| 1ou5A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 53.0 | 5.29e-01 | 100.0% | 93.6% |
| 2nrkA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 55.0 | 5.18e-01 | 100.0% | 97.0% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.59 | 29.0 | 3.62e-01 | 82.6% | 75.9% |
| 1u5tB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 22.0 | 3.04e-01 | 71.0% | 66.7% |
| 5c68A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 36.0 | 3.97e-01 | 72.5% | 79.8% |
| 2ei0A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 37.0 | 3.61e-01 | 74.6% | 92.1% |
| 1r94A00 | 2.60.300.12 | Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain | 0.50 | 32.0 | 3.84e-01 | 93.5% | 92.8% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3289584 | 316.2.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Rv2827c C-terminal domain-like › Rv2827c C-terminal domain-like | 0.81 | 61.0 | 6.14e-01 | 100.0% | 76.4% |
| 3963005 | 316.2.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Rv2827c C-terminal domain-like › Rv2827c C-terminal domain-like | 0.79 | 59.0 | 5.82e-01 | 99.3% | 73.1% |
| 5074217 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.79 | 74.0 | 6.55e-01 | 99.3% | 86.8% |
| 4958430 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.78 | 73.0 | 5.97e-01 | 100.0% | 97.1% |
| 4962252 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.78 | 74.0 | 6.41e-01 | 100.0% | 77.0% |
| 3197794 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.78 | 73.0 | 6.48e-01 | 99.3% | 77.4% |
| 5078939 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.78 | 73.0 | 6.98e-01 | 99.3% | 99.4% |
| 5040839 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.78 | 73.0 | 6.77e-01 | 100.0% | 87.1% |
| 5040978 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.78 | 73.0 | 6.30e-01 | 100.0% | 78.0% |
| 5079184 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.78 | 73.0 | 6.40e-01 | 100.0% | 96.9% |
| 4972724 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.78 | 72.0 | 6.43e-01 | 98.6% | 98.9% |
| 5018203 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.77 | 73.0 | 6.22e-01 | 100.0% | 74.8% |
| 5027809 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.77 | 73.0 | 6.11e-01 | 100.0% | 71.8% |
| 2092693 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.77 | 71.0 | 6.48e-01 | 99.3% | 89.8% |
| 4959743 | 316.1.1.39 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF2204 | 0.76 | 69.0 | 6.13e-01 | 96.4% | 93.2% |
| 4933931 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.76 | 71.0 | 6.54e-01 | 98.6% | 90.0% |
| 4927191 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.76 | 70.0 | 6.58e-01 | 98.6% | 93.9% |
| 5078572 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.76 | 70.0 | 6.85e-01 | 98.6% | 100.0% |
| 5058173 | 316.1.1.39 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF2204 | 0.76 | 71.0 | 6.07e-01 | 100.0% | 76.7% |
| 4961036 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.75 | 59.0 | 6.21e-01 | 98.6% | 90.4% |
| 3198176 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.75 | 71.0 | 6.27e-01 | 100.0% | 96.8% |
| 3726440 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.75 | 71.0 | 6.33e-01 | 100.0% | 78.9% |
| 5030984 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.75 | 69.0 | 6.25e-01 | 99.3% | 84.9% |
| 6828 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.75 | 70.0 | 6.66e-01 | 100.0% | 99.4% |
| 4940185 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.74 | 60.0 | 6.18e-01 | 98.6% | 89.2% |
| 5001397 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.74 | 68.0 | 5.89e-01 | 97.1% | 69.3% |
| 4977130 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.74 | 68.0 | 6.60e-01 | 98.6% | 98.1% |
| 4968501 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.74 | 70.0 | 5.78e-01 | 100.0% | 68.7% |
| 4992411 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.74 | 69.0 | 6.37e-01 | 98.6% | 81.2% |
| None | — | 0.74 | 67.0 | 6.30e-01 | 98.6% | 91.0% | |
| 3640051 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.74 | 68.0 | 5.73e-01 | 100.0% | 85.8% |
| 4993673 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.73 | 68.0 | 6.09e-01 | 98.6% | 83.7% |
| 4978492 | 316.1.1.39 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF2204 | 0.73 | 67.0 | 5.93e-01 | 98.6% | 76.9% |
| 3206164 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.73 | 66.0 | 5.54e-01 | 98.6% | 85.2% |
| 3195144 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.73 | 67.0 | 5.45e-01 | 100.0% | 86.4% |
| 3205500 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 66.0 | 5.62e-01 | 100.0% | 79.6% |
| 5044819 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 67.0 | 5.80e-01 | 99.3% | 100.0% |
| 3723794 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 66.0 | 5.52e-01 | 99.3% | 78.7% |
| 5069234 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 67.0 | 6.14e-01 | 99.3% | 82.1% |
| 3638659 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 65.0 | 5.42e-01 | 98.6% | 100.0% |
| 3508699 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.71 | 56.0 | 5.38e-01 | 82.6% | 97.4% |
| 3625467 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.71 | 55.0 | 5.31e-01 | 81.2% | 100.0% |
| 4983539 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.71 | 66.0 | 5.27e-01 | 100.0% | 88.1% |
| 5058624 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.71 | 62.0 | 6.20e-01 | 92.8% | 100.0% |
| 1179385 | 316.1.1.7 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Pox_polyA_pol | 0.71 | 60.0 | 5.58e-01 | 91.3% | 79.8% |
| 5076537 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.70 | 65.0 | 5.76e-01 | 98.6% | 92.1% |
| 3943586 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.70 | 56.0 | 5.90e-01 | 96.4% | 93.6% |
| 5021444 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.69 | 62.0 | 5.93e-01 | 98.6% | 93.1% |
| 3694935 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.69 | 61.0 | 5.48e-01 | 96.4% | 90.5% |
| 4998720 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.68 | 63.0 | 5.02e-01 | 100.0% | 87.0% |
| 3606375 | 316.1.1.14 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD | 0.68 | 61.0 | 4.94e-01 | 95.7% | 84.6% |
| 3281252 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 59.0 | 4.97e-01 | 98.6% | 58.2% |
| 4993567 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.67 | 60.0 | 5.79e-01 | 97.8% | 85.4% |
| 4927756 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.65 | 55.0 | 5.69e-01 | 97.1% | 96.2% |
| 3631215 | 316.1.1.14 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD | 0.65 | 57.0 | 4.97e-01 | 93.5% | 84.5% |
| 3704072 | 316.1.1.14 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD | 0.65 | 59.0 | 5.11e-01 | 97.8% | 83.9% |
| 2464378 | 192.27.1.1 ↗ | alpha bundles › Long alpha-hairpin › Helical hairpin in putative tRNA methyltransferase › Helical hairpin in putative tRNA methyltransferase › TrmK | 0.62 | 27.0 | 3.97e-01 | 78.3% | 87.1% |
| 3474661 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.53 | 32.0 | 3.56e-01 | 83.3% | 73.0% |
| 4456820 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.53 | 25.0 | 3.18e-01 | 84.1% | 75.0% |
| 4036399 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.52 | 25.0 | 3.13e-01 | 84.1% | 74.1% |
| 3739717 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.51 | 25.0 | 3.16e-01 | 84.1% | 76.5% |