←Back to structures

NC_041917.1__YP_009599860.1__FDH34_gp364__00364

Bact-Vir

Identity

Accession:: NC_041917 ↗
Kingdom:: phage

Quality

93.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Eneladusvirus› Serratia_phage_BF

TaxID: 1962671

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-74

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4c0aA01	1.10.220.20	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 ›	0.67	45.0	4.37e-01	100.0%	61.7%
4oiyA01	1.10.220.20	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 ›	0.64	42.0	4.09e-01	98.6%	60.5%
4hehA01	1.10.1240.10	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain	0.62	43.0	4.11e-01	100.0%	62.7%
5j1gA00	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.58	50.0	3.61e-01	100.0%	78.5%
1miwA03	1.20.58.560	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.58	48.0	4.40e-01	95.8%	73.0%
1xwmA00	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.56	43.0	3.24e-01	88.9%	90.1%
2o7tA00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.56	41.0	3.07e-01	79.2%	62.7%
7xcnM01	1.10.1240.10	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain	0.54	36.0	3.52e-01	98.6%	62.8%
2wbiA01	1.10.540.10	Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain	0.51	41.0	3.56e-01	91.7%	61.9%
2b0hA01	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.51	43.0	3.61e-01	95.8%	80.5%
1n00A03	1.10.220.10	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin	0.50	35.0	3.51e-01	98.6%	72.6%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3319723	168.1.1.0 ↗	alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain	0.65	57.0	3.20e-01	100.0%	11.1%
2978899	168.1.1.0 ↗	alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain	0.56	47.0	3.54e-01	100.0%	54.2%
None	—		0.55	46.0	2.75e-01	98.6%	16.9%
5049762	633.6.1.0 ↗	alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like	0.55	42.0	3.38e-01	81.9%	71.4%
3496835	192.17.1.10 ↗	alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › eIF-3c_N	0.54	43.0	3.71e-01	86.1%	93.9%
3663750	176.1.1.1 ↗	alpha arrays › Annexin › Annexin › Annexin › Annexin	0.54	38.0	3.78e-01	98.6%	72.0%
1872977	176.1.1.1 ↗	alpha arrays › Annexin › Annexin › Annexin › Annexin	0.53	37.0	3.74e-01	97.2%	74.3%
3993352	168.1.1.0 ↗	alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain	0.53	43.0	2.59e-01	98.6%	16.4%
4962049	101.1.1.557 ↗	alpha arrays › HTH › HTH › Three-helical HTH › DUF7437	0.52	37.0	3.65e-01	97.2%	68.8%
2123134	168.1.1.1 ↗	alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain › Sec7	0.51	42.0	3.23e-01	100.0%	55.3%
3794599	176.1.1.1 ↗	alpha arrays › Annexin › Annexin › Annexin › Annexin	0.51	36.0	3.24e-01	100.0%	50.5%
3448406	109.4.1.167 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rif1_N	0.51	42.0	3.17e-01	95.8%	85.6%