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NC_041917.1__YP_009599885.1__FDH34_gp531__00389

Bact-Vir

NC_041917.1__YP_009599885.1__FDH34_gp531__00389

Identity

Accession:
NC_041917 ↗
Kingdom:
phage

Quality

80.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Eneladusvirus› Serratia_phage_BF

TaxID: 1962671

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-61
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2iz4A02 2.20.25.590 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.64 43.0 4.71e-01 85.2% 90.5%
2od0A00 3.30.1460.30 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone 0.64 45.0 3.66e-01 81.5% 39.8%
3facA00 2.170.150.70 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › 0.62 47.0 3.89e-01 87.0% 98.2%
1twfI01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 46.0 4.87e-01 92.6% 97.8%
2o8bA04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.62 45.0 3.97e-01 79.6% 73.5%
5xrwC00 2.30.330.10 Mainly Beta › Roll › Surface presentation of antigens (SPOA) › SpoA-like 0.62 42.0 3.78e-01 70.4% 75.6%
1xhhA00 2.60.40.1900 Mainly Beta › Sandwich › Immunoglobulin-like › Beta-microseminoprotein (PSP94) domain 0.62 41.0 3.47e-01 92.6% 40.7%
2jx8A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.60 38.0 4.05e-01 75.9% 74.5%
1ybiA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 47.0 3.52e-01 88.9% 67.4%
1itxA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.59 38.0 3.50e-01 75.9% 49.3%
6rwcA02 2.20.25.590 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.59 37.0 4.17e-01 79.6% 89.7%
3alfA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.59 36.0 3.38e-01 75.9% 47.1%
1goiA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.59 40.0 3.38e-01 70.4% 60.0%
2gumB01 2.30.30.1230 Mainly Beta › Roll › SH3 type barrels. › 0.58 47.0 4.06e-01 100.0% 85.0%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.58 40.0 3.43e-01 74.1% 91.1%
1ywyA00 3.40.1170.40 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › Protein of unknown function DUF3203 0.58 46.0 4.27e-01 96.3% 90.5%
3weeB03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.56 45.0 3.65e-01 94.4% 81.7%
4erdA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 41.0 3.39e-01 83.3% 71.3%
1yw5A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.55 46.0 4.42e-01 98.1% 88.9%
1wxrA03 3.30.160.280 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 41.0 3.69e-01 79.6% 80.3%
4cswA02 3.40.366.30 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 0.55 38.0 2.74e-01 85.2% 22.7%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.55 44.0 3.84e-01 96.3% 60.0%
4dwsA01 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.55 40.0 3.12e-01 77.8% 90.2%
3ffvA00 3.40.1580.20 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Syd protein 0.55 45.0 3.18e-01 94.4% 49.2%
1wiiA01 2.20.25.190 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.54 40.0 3.85e-01 94.4% 71.0%
3oa5A01 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.54 39.0 2.99e-01 77.8% 99.2%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 41.0 3.71e-01 96.3% 91.3%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.53 43.0 3.50e-01 94.4% 74.3%
1ddvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.63e-01 98.1% 92.3%
2fb5A02 3.40.1700.10 Alpha Beta › 3-Layer(aba) Sandwich › YojJ-like (1 › DNA integrity scanning protein, DisA, N-terminal domain 0.52 38.0 2.94e-01 81.5% 100.0%
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 43.0 2.76e-01 94.4% 18.4%
1k8iA01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.52 36.0 3.25e-01 72.2% 83.1%
5yh4A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 38.0 2.76e-01 83.3% 92.2%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.51 37.0 3.76e-01 88.9% 82.7%
2gfoA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 44.0 2.72e-01 100.0% 24.5%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4449615 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.71 49.0 4.17e-01 94.4% 44.4%
4379527 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.70 48.0 4.17e-01 94.4% 45.9%
4989851 2007.1.5.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like 0.69 48.0 3.24e-01 72.2% 52.3%
4040812 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.67 46.0 3.95e-01 96.3% 43.8%
4406214 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.66 45.0 3.80e-01 85.2% 40.9%
3947154 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.65 45.0 3.91e-01 94.4% 44.4%
4996608 2007.9.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 0.65 49.0 3.37e-01 92.6% 22.5%
3396514 386.1.1.259 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29169 0.64 38.0 4.06e-01 75.9% 68.9%
3975926 2.4.1.17 ↗ beta barrels › OB-fold › MOP-like › MOP-like › DUF7765 0.63 49.0 4.27e-01 87.0% 65.9%
3664203 2003.1.5.31 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS 0.62 46.0 2.76e-01 79.6% 73.6%
4236664 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.61 50.0 3.68e-01 98.1% 34.5%
3927052 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.61 46.0 3.65e-01 81.5% 53.9%
3943200 159.1.4.3 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Type II deoxyuridine triphosphatase-related › PRA-PH 0.61 44.0 2.84e-01 77.8% 16.5%
3260311 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.61 52.0 3.02e-01 100.0% 15.4%
3175415 211.1.1.55 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF29700 0.60 48.0 4.73e-01 96.3% 83.3%
4411256 2004.1.1.80 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin 0.60 51.0 3.34e-01 92.6% 41.5%
3961651 4091.1.1.1 ↗ beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD 0.60 41.0 3.38e-01 70.4% 89.0%
5047010 2008.1.1.63 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › MvaI_BcnI 0.60 52.0 3.43e-01 96.3% 71.1%
4148226 101.35.1.5 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.60 39.0 3.19e-01 72.2% 33.6%
5028555 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.59 45.0 4.31e-01 85.2% 80.0%
4336160 319.1.1.21 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › GvpH 0.59 51.0 4.47e-01 96.3% 78.8%
3177048 719.2.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like 0.59 46.0 3.96e-01 90.7% 85.3%
3737735 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.59 45.0 2.72e-01 83.3% 94.9%
3606110 7516.1.1.0 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.58 44.0 2.76e-01 83.3% 52.9%
4937515 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.58 41.0 3.57e-01 77.8% 87.8%
1631501 217.1.1.2 ↗ a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 0.58 39.0 2.51e-01 72.2% 15.2%
3699229 6110.1.1.1 ↗ alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.57 43.0 2.52e-01 94.4% 9.4%
3974974 241.13.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › SopD 0.57 45.0 3.50e-01 87.0% 40.0%
3627795 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 45.0 4.06e-01 98.1% 68.2%
3715372 6110.1.1.1 ↗ alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.56 40.0 2.52e-01 77.8% 17.8%
3297758 5.3.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.56 50.0 3.55e-01 100.0% 57.5%
3298595 10.1.1.11 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 0.56 47.0 3.47e-01 98.1% 85.8%
1684841 241.13.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › SopD 0.55 44.0 3.78e-01 87.0% 55.3%
1170594 885.1.1.1 ↗ a+b complex topology › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain › NusA_N 0.55 44.0 3.84e-01 96.3% 60.0%
4298363 59.1.4.1 ↗ beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N 0.55 42.0 3.03e-01 90.7% 42.7%
3351647 5.3.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.55 47.0 3.60e-01 94.4% 77.5%
None — 0.54 43.0 2.87e-01 92.6% 84.1%
3412093 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 46.0 2.81e-01 98.1% 27.4%
3936775 59.1.4.1 ↗ beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N 0.53 41.0 3.05e-01 90.7% 46.5%
2560670 2003.1.10.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.53 41.0 3.50e-01 90.7% 87.1%
3461141 3880.1.1.0 ↗ beta barrels › Glycoside hydrolase family 127 C-terminal domain › Glycoside hydrolase family 127 C-terminal domain › Glycoside hydrolase family 127 C-terminal domain 0.53 39.0 3.21e-01 83.3% 80.9%
3335997 5.3.1.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop 0.53 47.0 3.55e-01 100.0% 56.9%
3618501 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.53 40.0 3.51e-01 83.3% 58.8%
4984442 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.53 41.0 3.03e-01 96.3% 82.8%
3497279 59.1.4.0 ↗ beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 0.53 40.0 3.04e-01 90.7% 51.0%
3621466 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 43.0 2.62e-01 92.6% 36.0%
4996063 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 38.0 3.59e-01 77.8% 87.7%
3305371 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 38.0 3.35e-01 83.3% 54.4%
3303185 5.3.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.52 45.0 3.31e-01 100.0% 58.7%
1787990 2003.1.2.49 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 0.51 40.0 3.02e-01 96.3% 93.4%
3537276 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.51 40.0 3.41e-01 94.4% 51.6%
3498865 314.1.1.0 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.51 35.0 2.30e-01 79.6% 81.8%
3998938 6110.1.1.1 ↗ alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.50 37.0 2.23e-01 85.2% 9.4%
3205074 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 35.0 3.58e-01 85.2% 84.0%
3581143 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.50 36.0 3.50e-01 88.9% 67.7%
D2 high residues 63-166
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.85 60.0 5.80e-01 73.1% 99.1%
5xtck00 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.83 39.0 4.12e-01 92.3% 50.5%
8ek4A01 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.79 57.0 5.26e-01 76.0% 97.0%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.78 58.0 3.86e-01 77.9% 21.3%
7ru9C01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.78 57.0 4.14e-01 80.8% 29.6%
1t98A02 1.20.58.590 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain 0.76 62.0 5.27e-01 86.5% 87.7%
1io1A01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.76 54.0 4.51e-01 73.1% 66.3%
3zpjA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.75 56.0 3.86e-01 81.7% 23.3%
2katA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 51.0 4.98e-01 79.8% 64.3%
5cwhA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.73 57.0 4.96e-01 83.7% 76.9%
4gyoA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.72 60.0 4.58e-01 87.5% 53.2%
2chpA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.71 49.0 4.34e-01 71.2% 100.0%
1zs3A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.69 52.0 4.30e-01 76.9% 86.0%
2vxxA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.68 50.0 4.17e-01 76.0% 92.4%
3hiuD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.68 49.0 4.25e-01 74.0% 91.4%
1fewA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 50.0 4.21e-01 76.9% 78.0%
4uqxA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.68 46.0 4.96e-01 86.5% 82.0%
3kkbA00 1.20.120.880 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain 0.68 50.0 4.68e-01 76.9% 69.8%
4hkaA01 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 59.0 4.26e-01 96.2% 71.1%
2qqyA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.67 48.0 4.38e-01 74.0% 100.0%
1ihgA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 47.0 4.15e-01 86.5% 51.0%
2i2oA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 53.0 4.23e-01 85.6% 44.5%
5an3A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 47.0 4.40e-01 73.1% 62.0%
3gw4A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.66 48.0 3.85e-01 76.9% 40.1%
3ea5D00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.66 53.0 3.14e-01 86.5% 16.5%
1f2eA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.65 53.0 5.34e-01 88.5% 93.4%
4i1aA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 50.0 3.69e-01 82.7% 68.6%
2vvwA00 1.10.437.20 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus 0.65 50.0 4.48e-01 83.7% 58.7%
5u56A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.64 54.0 5.33e-01 91.3% 91.1%
3unoE00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.64 45.0 3.82e-01 72.1% 82.6%
3bjdA01 1.10.1240.20 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain 0.64 44.0 4.75e-01 72.1% 90.9%
3qwwA03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 48.0 3.97e-01 84.6% 43.5%
2pvqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.64 53.0 5.35e-01 90.4% 94.3%
4me2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 49.0 4.07e-01 86.5% 44.8%
4hojA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.62 51.0 5.13e-01 88.5% 95.1%
3ro3A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 49.0 4.20e-01 82.7% 73.0%
4jhrB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 50.0 3.62e-01 86.5% 68.2%
7e9uA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.62 53.0 3.52e-01 96.2% 55.3%
3cqcB01 1.20.58.1380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 46.0 4.92e-01 79.8% 92.2%
2fjcB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.61 47.0 4.15e-01 83.7% 96.8%
4g1tA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 43.0 4.16e-01 76.9% 64.2%
4w8pA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.60 45.0 4.21e-01 78.8% 81.5%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.60 48.0 4.39e-01 87.5% 82.7%
4rfsS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.59 49.0 4.12e-01 92.3% 58.3%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.59 44.0 4.08e-01 78.8% 63.4%
2yxlA01 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.58 45.0 4.03e-01 83.7% 88.2%
3t9jA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 44.0 3.95e-01 80.8% 100.0%
2bnlC00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 42.0 3.90e-01 77.9% 73.1%
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 47.0 4.28e-01 93.3% 83.3%
1h97A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 43.0 3.84e-01 84.6% 66.0%
1yhuB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 41.0 3.73e-01 80.8% 64.6%
3r2cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.54 41.0 3.83e-01 82.7% 100.0%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 41.0 3.69e-01 83.7% 67.1%
2ongA01 1.50.10.130 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain 0.52 45.0 3.66e-01 97.1% 86.3%
3kwoA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 42.0 3.78e-01 92.3% 85.9%
1gqeA01 1.20.58.410 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor 0.50 41.0 3.98e-01 98.1% 77.9%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4945270 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.80 59.0 5.31e-01 79.8% 57.1%
None — 0.79 58.0 3.80e-01 77.9% 19.8%
3707418 109.4.1.285 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PSMD12-CSN4_N 0.79 58.0 3.94e-01 76.9% 22.5%
3600284 109.4.1.1140 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 0.77 57.0 3.68e-01 89.4% 17.3%
5003426 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.75 57.0 5.49e-01 78.8% 75.7%
3585432 604.1.1.98 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Anc-1 0.74 54.0 5.29e-01 76.9% 91.3%
3572847 604.1.1.162 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF4716 0.74 51.0 4.97e-01 71.2% 90.4%
4184645 109.4.1.890 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_C 0.73 56.0 5.00e-01 88.5% 57.9%
3495843 1203.1.2.0 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.73 50.0 3.97e-01 100.0% 37.4%
3575496 109.4.1.957 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TTI1_N 0.71 60.0 3.71e-01 90.4% 40.9%
3363789 109.4.1.285 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PSMD12-CSN4_N 0.71 56.0 3.94e-01 90.4% 26.6%
3616669 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.70 51.0 4.93e-01 75.0% 98.3%
3738554 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 53.0 3.88e-01 79.8% 40.4%
3923962 109.4.1.390 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TH1 0.69 54.0 4.42e-01 85.6% 45.8%
4022159 109.4.1.146 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_load 0.68 52.0 3.86e-01 82.7% 39.3%
3731571 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 49.0 4.07e-01 76.9% 51.4%
3204305 109.26.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C 0.67 57.0 3.38e-01 93.3% 12.5%
3845925 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.67 50.0 4.78e-01 80.8% 100.0%
3537779 192.29.1.19 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Cornichon 0.66 47.0 4.07e-01 73.1% 74.4%
4024685 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 55.0 3.38e-01 90.4% 24.8%
3245538 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.65 48.0 4.80e-01 76.9% 100.0%
4959990 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.65 50.0 4.67e-01 82.7% 90.8%
3871154 109.4.1.72 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C 0.64 53.0 3.59e-01 91.3% 42.5%
3406588 3684.1.1.0 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.64 48.0 3.95e-01 78.8% 74.5%
3597998 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 48.0 3.64e-01 87.5% 32.3%
3459724 604.1.1.102 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF8324 0.63 48.0 4.69e-01 80.8% 97.4%
2527147 4266.1.1.3 ↗ alpha bundles › Hyaluronidase domain-like › Hyaluronidase post-catalytic domain-like › Hyaluronidase post-catalytic domain-like › NagJ_C 0.63 43.0 4.12e-01 76.9% 59.3%
3597830 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.63 41.0 3.98e-01 76.9% 58.3%
3935426 109.4.1.791 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_17 0.62 43.0 4.50e-01 78.8% 77.9%
3706334 109.4.1.850 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RPN2_N 0.62 42.0 3.83e-01 80.8% 50.3%
3629583 109.4.1.449 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2,TPR_8 0.61 50.0 3.04e-01 88.5% 53.2%
4003767 603.1.1.136 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HB_ELP1 0.60 51.0 4.38e-01 93.3% 97.6%
5071224 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.60 49.0 3.44e-01 93.3% 62.4%
3414246 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 46.0 4.23e-01 86.5% 62.1%
3651068 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 49.0 4.17e-01 89.4% 59.4%
4510357 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 47.0 3.98e-01 87.5% 50.6%
5028288 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 46.0 4.25e-01 87.5% 65.5%
3754394 109.4.1.2407 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_6, TPR_8, TPR_11 0.57 48.0 3.01e-01 91.3% 22.1%
1822946 109.4.1.292 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3a_PCI_TPR-like 0.57 44.0 3.56e-01 84.6% 44.2%