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NC_041929.1__YP_009601282.1__FDH46_gp321__00157

Bact-Vir

NC_041929.1__YP_009601282.1__FDH46_gp321__00157

Identity

Accession:
NC_041929 ↗
Kingdom:
phage

Quality

74.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-32
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1j2jB00 1.20.5.170 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.78 61.0 5.83e-01 100.0% 78.0%
2d5wA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.64 45.0 2.88e-01 100.0% 15.6%
2jmlA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.63 47.0 3.67e-01 93.5% 34.6%
8a0rA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.59 42.0 2.87e-01 100.0% 18.5%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4076556 607.1.1.1 alpha arrays › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › PEP-utilisers_N 0.79 61.0 4.30e-01 100.0% 27.0%
3239615 2006.1.4.10 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 0.73 55.0 3.49e-01 90.3% 16.8%
3514625 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.69 55.0 5.26e-01 100.0% 82.5%