←Back to structures
NC_041929.1__YP_009601356.1__FDH46_gp247__00231
Bact-VirNC_041929.1__YP_009601356.1__FDH46_gp247__00231
Identity
- Accession:
- NC_041929 ↗
- Kingdom:
- phage
Quality
79.1
mean pLDDT
Taxonomy
TaxID: 1647403
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-136
Domain cluster:
rep: OL955261.1__UIS25292.1__X__00092__D64-190
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.75 | 32.0 | 4.01e-01 | 91.7% | 64.3% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.58 | 28.0 | 3.76e-01 | 73.7% | 93.7% |
| 2p4bB02 | 3.30.200.100 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain | 0.52 | 34.0 | 3.92e-01 | 91.7% | 90.8% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 30.0 | 3.77e-01 | 75.2% | 100.0% |
| 1r0mA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 35.0 | 3.62e-01 | 92.5% | 73.1% |
| 3w7tA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.50 | 41.0 | 3.48e-01 | 89.5% | 92.7% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 37.0 | 3.98e-01 | 82.0% | 89.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4108772 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.72 | 26.0 | 3.53e-01 | 89.5% | 60.0% |
| 4965032 | 375.1.1.343 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7835 | 0.66 | 29.0 | 4.38e-01 | 82.7% | 100.0% |
| 4973114 | 218.1.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like | 0.53 | 33.0 | 3.83e-01 | 91.0% | 86.3% |
| 3923143 | 633.23.1.17 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DuoxA | 0.53 | 40.0 | 3.29e-01 | 79.7% | 93.8% |
| 3546354 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.51 | 39.0 | 2.77e-01 | 79.7% | 32.2% |
| 3999197 | 5.1.4.164 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 | 0.50 | 40.0 | 2.88e-01 | 83.5% | 37.8% |
D2
medium
residues 145-185