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NC_041929.1__YP_009601440.1__FDH46_gp163__00315
Bact-VirNC_041929.1__YP_009601440.1__FDH46_gp163__00315
Identity
- Accession:
- NC_041929 ↗
- Kingdom:
- phage
Quality
63.3
mean pLDDT
Taxonomy
TaxID: 1647403
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-47
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.74 | 62.0 | 5.09e-01 | 100.0% | 65.9% |
| 3doaA03 | 3.40.970.40 | Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease HI; Chain A › fibrinogen binding protein from staphylococcus aureus domain like | 0.73 | 52.0 | 5.23e-01 | 76.2% | 95.3% |
| 2xqyA03 | 2.60.40.3190 | Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain | 0.66 | 53.0 | 3.88e-01 | 100.0% | 35.3% |
| 3es1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 43.0 | 3.16e-01 | 100.0% | 23.0% |
| 3fl7A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 50.0 | 4.05e-01 | 100.0% | 44.2% |
| 2aehA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 47.0 | 3.79e-01 | 100.0% | 40.6% |
| 1pqsA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 44.0 | 3.84e-01 | 100.0% | 48.1% |
| 2mngA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 47.0 | 3.41e-01 | 100.0% | 29.8% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 50.0 | 3.57e-01 | 100.0% | 38.7% |
| 2q0oA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.58 | 46.0 | 3.10e-01 | 88.1% | 90.5% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 49.0 | 3.49e-01 | 100.0% | 38.7% |
| 5z06B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 45.0 | 3.70e-01 | 100.0% | 44.6% |
| 4p4tA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 44.0 | 2.71e-01 | 100.0% | 13.1% |
| 4ehoB03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.56 | 42.0 | 2.85e-01 | 83.3% | 73.7% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.56 | 42.0 | 3.99e-01 | 100.0% | 67.8% |
| 2nytD00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.56 | 45.0 | 3.11e-01 | 100.0% | 31.8% |
| 1r9fA01 | 3.30.390.180 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 | 0.55 | 43.0 | 3.40e-01 | 100.0% | 55.0% |
| 4ksnA00 | 6.20.250.80 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.53 | 46.0 | 3.99e-01 | 100.0% | 78.5% |
| 1dyqA02 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 42.0 | 3.04e-01 | 100.0% | 73.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3958896 | 4187.2.1.0 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 | 0.67 | 53.0 | 4.92e-01 | 100.0% | 75.0% |
| 5080205 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.61 | 51.0 | 4.90e-01 | 100.0% | 86.0% |
| 5037415 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 50.0 | 3.56e-01 | 100.0% | 38.5% |
| 3687651 | 4176.1.1.2 ↗ | a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N | 0.59 | 47.0 | 3.07e-01 | 100.0% | 18.0% |
| 4985633 | 75.1.1.4 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › Cyclophil_like | 0.58 | 49.0 | 3.52e-01 | 100.0% | 85.9% |
| 3250477 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 41.0 | 3.15e-01 | 88.1% | 31.1% |
| 5001166 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.52 | 39.0 | 3.01e-01 | 100.0% | 30.4% |