←Back to structures
NC_041929.1__YP_009601449.1__FDH46_gp154__00324
Bact-VirNC_041929.1__YP_009601449.1__FDH46_gp154__00324
Identity
- Accession:
- NC_041929 ↗
- Kingdom:
- phage
Quality
87.3
mean pLDDT
Taxonomy
TaxID: 1647403
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 45-121
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a6zA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.57 | 49.0 | 3.79e-01 | 98.7% | 42.5% |
| 1k8iA01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.55 | 43.0 | 4.33e-01 | 97.4% | 88.3% |
| 1yw5A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.52 | 36.0 | 3.89e-01 | 75.3% | 88.9% |
| 2ctdA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 26.0 | 2.45e-01 | 81.8% | 35.4% |
| 3dbxA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.52 | 44.0 | 3.45e-01 | 98.7% | 42.2% |
| 2zwrB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 42.0 | 3.23e-01 | 96.1% | 90.3% |
| 3jvgA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.51 | 43.0 | 3.47e-01 | 100.0% | 86.1% |
| 4msxA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 38.0 | 3.64e-01 | 80.5% | 81.7% |
| 2oc3A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.50 | 35.0 | 2.49e-01 | 76.6% | 55.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3297192 | 4.2.1.4 ↗ | beta barrels › SH3 › SAND › SAND › TDBD | 0.58 | 43.0 | 4.04e-01 | 84.4% | 87.6% |
| 3297614 | 4.1.1.296 ↗ | beta barrels › SH3 › SH3 › SH3 › TDBD | 0.58 | 43.0 | 3.98e-01 | 83.1% | 87.6% |
| 5025520 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.50 | 41.0 | 2.86e-01 | 96.1% | 76.7% |