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NC_041936.1__YP_009602162.1__FDH53_gp197__00196
Bact-VirNC_041936.1__YP_009602162.1__FDH53_gp197__00196
Identity
- Accession:
- NC_041936 ↗
- Kingdom:
- phage
Quality
92.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Krischvirus›
Escherichia_phage_ECD7
TaxID: 1981499
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-70
Domain cluster:
rep: OQ884028.1__WNO29623.1__X__00007__D9-61
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5dicA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.63 | 44.0 | 3.56e-01 | 81.0% | 40.0% |
| 2e5vA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 47.0 | 3.14e-01 | 85.7% | 81.4% |
| 2p11A02 | 1.10.286.50 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.60 | 53.0 | 5.08e-01 | 98.4% | 83.8% |
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.60 | 51.0 | 4.00e-01 | 98.4% | 45.1% |
| 5lewA03 | 1.10.10.1600 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain | 0.60 | 51.0 | 4.89e-01 | 98.4% | 100.0% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.59 | 52.0 | 3.76e-01 | 100.0% | 75.0% |
| 6k8nA02 | 1.10.290.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 | 0.58 | 46.0 | 3.96e-01 | 96.8% | 100.0% |
| 6cfcA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.57 | 47.0 | 3.59e-01 | 96.8% | 37.3% |
| 1hqcA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 43.0 | 4.11e-01 | 84.1% | 71.1% |
| 2w4sA00 | 1.10.10.1440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain | 0.56 | 48.0 | 4.40e-01 | 98.4% | 81.4% |
| 2kt2A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 45.0 | 4.37e-01 | 92.1% | 97.1% |
| 1oo0A00 | 3.30.1560.10 | Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi | 0.53 | 47.0 | 3.65e-01 | 100.0% | 84.0% |
| 1beoA00 | 1.10.239.10 | Mainly Alpha › Orthogonal Bundle › Beta-cryptogein › Elicitin domain | 0.52 | 41.0 | 3.64e-01 | 95.2% | 58.2% |
| 5h28A01 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.50 | 38.0 | 2.93e-01 | 82.5% | 67.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3530273 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.61 | 44.0 | 3.02e-01 | 100.0% | 20.9% |
| 3958070 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.58 | 48.0 | 2.92e-01 | 100.0% | 12.6% |
| 3171048 | 603.1.1.205 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29691 | 0.55 | 45.0 | 3.83e-01 | 100.0% | 91.7% |
| 3595781 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 40.0 | 3.01e-01 | 81.0% | 70.3% |
| 4017838 | 2484.1.1.57 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ydc2-catalyt | 0.54 | 48.0 | 3.16e-01 | 100.0% | 27.7% |
| 3742080 | 3252.2.1.0 ↗ | alpha arrays › SHQ1 C-terminal domain-like › Anaphase-promoting complex subunit 5 N-terminal domain › Anaphase-promoting complex subunit 5 N-terminal domain | 0.53 | 45.0 | 3.50e-01 | 100.0% | 47.7% |
| None | — | 0.52 | 39.0 | 2.21e-01 | 82.5% | 51.4% | |
| 4449498 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.51 | 38.0 | 3.62e-01 | 88.9% | 66.7% |
| 5001433 | 244.2.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim | 0.51 | 42.0 | 3.44e-01 | 100.0% | 82.2% |