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NC_041948.1__YP_009603160.1__FDH65_gp71__00071
Bact-VirNC_041948.1__YP_009603160.1__FDH65_gp71__00071
Identity
- Accession:
- NC_041948 ↗
- Kingdom:
- phage
Quality
72.4
mean pLDDT
Taxonomy
TaxID: 1772295
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 74-188
Domain cluster:
rep: NC_055779.1__YP_010099651.1__KNU23_gp72__00072__D21-113
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hrsA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.78 | 27.0 | 3.38e-01 | 97.4% | 48.7% |
| 1dj7B00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 26.0 | 3.23e-01 | 86.1% | 56.2% |
| 2lepA00 | 3.30.70.2350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 33.0 | 4.38e-01 | 93.9% | 92.1% |
| 1oxxK03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.58 | 25.0 | 3.74e-01 | 78.3% | 100.0% |
| 1utaA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.57 | 29.0 | 3.51e-01 | 91.3% | 72.7% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 47.0 | 3.59e-01 | 100.0% | 86.7% |
| 3ahpA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.39e-01 | 77.4% | 68.9% |
| 2zogA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 46.0 | 3.41e-01 | 100.0% | 90.5% |
| 2l6mA00 | 3.30.160.400 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 35.0 | 3.70e-01 | 70.4% | 92.1% |
| 2nuhA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.38e-01 | 76.5% | 70.2% |
| 4e98C00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.36e-01 | 77.4% | 69.5% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 32.0 | 3.39e-01 | 76.5% | 71.3% |
| 1p1lA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 31.0 | 3.34e-01 | 77.4% | 70.6% |
| 2mdaA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.50 | 31.0 | 3.32e-01 | 75.7% | 72.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3471203 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.59 | 47.0 | 3.41e-01 | 85.2% | 82.7% |
| 5053352 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 38.0 | 3.42e-01 | 70.4% | 93.8% |
| 4015495 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.55 | 38.0 | 3.80e-01 | 79.1% | 68.3% |
| 3935863 | 5.1.4.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP | 0.54 | 42.0 | 2.90e-01 | 83.5% | 94.7% |
| 1873409 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.53 | 42.0 | 3.44e-01 | 84.3% | 88.8% |
| 4374003 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.52 | 33.0 | 3.52e-01 | 74.8% | 73.5% |
| 4975231 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.52 | 40.0 | 3.38e-01 | 80.9% | 73.2% |
| 5000745 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.52 | 39.0 | 3.51e-01 | 80.0% | 69.7% |
| 4944847 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.51 | 32.0 | 3.38e-01 | 77.4% | 69.2% |
| 4058358 | 327.11.2.26 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_N4BP1_1st | 0.51 | 32.0 | 3.72e-01 | 74.8% | 90.0% |
| 3583468 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.51 | 32.0 | 3.30e-01 | 77.4% | 66.4% |
| 5041156 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.50 | 38.0 | 3.41e-01 | 80.0% | 73.9% |
| 3898132 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.50 | 32.0 | 2.99e-01 | 77.4% | 52.1% |
| 4932235 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.50 | 32.0 | 3.33e-01 | 77.4% | 70.2% |