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NC_041949.1__YP_009603269.1__FDH66_gp17__00081

Bact-Vir

NC_041949.1__YP_009603269.1__FDH66_gp17__00081

Identity

Accession:
NC_041949 ↗
Kingdom:
phage

Quality

93.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-67
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3duzA03 6.10.250.3010 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.63 53.0 5.03e-01 89.6% 81.8%
1cjaA01 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.60 26.0 1.98e-01 73.1% 18.0%
2jvnA00 3.90.640.80 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.54 41.0 3.33e-01 80.6% 100.0%
1ecsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 38.0 3.16e-01 74.6% 83.3%
4hfkB00 1.20.120.1620 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.53 33.0 2.94e-01 77.6% 41.8%
3qupA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 30.0 2.98e-01 76.1% 52.7%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.50 43.0 3.71e-01 100.0% 60.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3962855 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.64 31.0 2.59e-01 79.1% 25.7%
4524863 506.2.1.2 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.59 39.0 3.53e-01 70.1% 62.1%
3177024 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 52.0 4.36e-01 100.0% 66.4%
3604349 304.48.1.28 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Csm1_B 0.52 42.0 3.13e-01 94.0% 59.5%