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NC_041950.1__YP_009603325.1__FDH67_gp51__00051
Bact-VirNC_041950.1__YP_009603325.1__FDH67_gp51__00051
Identity
- Accession:
- NC_041950 ↗
- Kingdom:
- phage
Quality
85.9
mean pLDDT
Taxonomy
TaxID: 1821555
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 30-79
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rq5A02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.90 | 79.0 | 4.42e-01 | 94.0% | 31.5% |
| 1x0tA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.87 | 65.0 | 6.08e-01 | 80.0% | 70.5% |
| 4cj0A02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.86 | 79.0 | 4.48e-01 | 98.0% | 31.2% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.85 | 70.0 | 5.91e-01 | 92.0% | 79.5% |
| 2qkdA02 | 2.60.120.1040 | Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain | 0.77 | 61.0 | 4.42e-01 | 88.0% | 40.7% |
| 3k6tB00 | 1.20.5.4010 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.75 | 62.0 | 6.32e-01 | 94.0% | 100.0% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 62.0 | 5.52e-01 | 96.0% | 93.2% |
| 4j7zF00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.72 | 58.0 | 4.72e-01 | 90.0% | 50.0% |
| 1whuA00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.70 | 54.0 | 4.32e-01 | 86.0% | 41.3% |
| 1wpbG01 | 1.10.287.680 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 52.0 | 5.08e-01 | 82.0% | 83.3% |
| 3if8B02 | 1.20.58.730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 53.0 | 4.20e-01 | 88.0% | 42.0% |
| 2iexA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.66 | 47.0 | 4.74e-01 | 80.0% | 76.5% |
| 4ex8A00 | 3.40.1790.10 | Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain | 0.64 | 53.0 | 3.29e-01 | 94.0% | 84.7% |
| 3l4aA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.56 | 40.0 | 2.99e-01 | 74.0% | 64.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.95 | 82.0 | 4.71e-01 | 98.0% | 12.1% | |
| 3287592 | 3443.1.1.0 ↗ | alpha duplicates or obligate multimers › Get5 carboxyl domain › Get5 carboxyl domain › Get5 carboxyl domain | 0.93 | 77.0 | 7.80e-01 | 88.0% | 90.0% |
| 3693121 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.92 | 69.0 | 5.12e-01 | 78.0% | 35.5% |
| 4977068 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.89 | 67.0 | 5.13e-01 | 80.0% | 41.3% |
| 5024129 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.87 | 68.0 | 7.19e-01 | 84.0% | 91.1% |
| 4282159 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.83 | 67.0 | 4.69e-01 | 90.0% | 44.5% |
| 4237615 | 7515.1.1.15 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest, Metalloenzyme | 0.82 | 58.0 | 3.42e-01 | 90.0% | 10.0% |
| 3929469 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 57.0 | 3.83e-01 | 94.0% | 43.1% |
| 3581723 | 568.1.1.0 ↗ | few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related | 0.68 | 50.0 | 4.58e-01 | 82.0% | 60.0% |
| 3522566 | 568.1.1.4 ↗ | few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related › CHCH | 0.67 | 48.0 | 4.37e-01 | 78.0% | 57.1% |
| 3602968 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.62 | 56.0 | 4.20e-01 | 100.0% | 99.2% |