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NC_041958.1__YP_009603875.1__FDH82_gp68__00068

Bact-Vir

NC_041958.1__YP_009603875.1__FDH82_gp68__00068

Identity

Accession:
NC_041958 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-135
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27119.1 best Phage_YdaY 50.3 3.00e-13 89.1% 81.0%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xvtC00 1.10.150.510 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family 0.65 36.0 4.17e-01 84.5% 74.7%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.62 40.0 4.55e-01 87.3% 88.6%
2cgeA03 1.20.120.790 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Heat shock protein 90, C-terminal domain 0.57 36.0 3.20e-01 80.0% 45.1%
4iv6B01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.52 36.0 3.55e-01 70.9% 99.1%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3905839 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.58 45.0 3.76e-01 80.9% 85.9%
3385027 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.54 46.0 3.40e-01 94.5% 87.2%
4965656 4336.1.1.1 alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF 0.51 31.0 3.11e-01 88.2% 56.5%