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NC_041961.1__YP_009604091.1__FDH86_gp066__00066

Bact-Vir

NC_041961.1__YP_009604091.1__FDH86_gp066__00066

Identity

Accession:
NC_041961 ↗
Kingdom:
phage

Quality

71.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Tankvirus› Arthrobacter_phage_Tank

TaxID: 1772319

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 112-172
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hzmA02 2.20.140.20 Mainly Beta › Single Sheet › q64v53_bacfr protein fold › 0.67 58.0 5.29e-01 100.0% 97.6%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 55.0 3.50e-01 100.0% 17.7%
2xstA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 57.0 4.33e-01 98.4% 69.1%
1dleA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 45.0 3.54e-01 72.1% 69.0%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 54.0 4.63e-01 95.1% 60.6%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.64 44.0 3.85e-01 70.5% 73.9%
2bhgA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.64 45.0 3.96e-01 73.8% 84.8%
4innA00 2.40.128.520 Mainly Beta › Beta Barrel › Lipocalin › 0.64 55.0 4.26e-01 100.0% 82.2%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.64 55.0 4.65e-01 100.0% 86.0%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 49.0 3.88e-01 100.0% 40.8%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.63 46.0 3.76e-01 100.0% 41.6%
2cs0A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.63 53.0 4.62e-01 95.1% 63.2%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.63 54.0 3.76e-01 100.0% 81.4%
2pn2A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.62 42.0 3.28e-01 70.5% 87.6%
2o6cA00 2.60.40.2480 Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type 0.62 46.0 3.45e-01 100.0% 31.0%
1a1aB00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 52.0 4.40e-01 95.1% 61.8%
4n3tA00 2.60.40.200 Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain 0.61 52.0 3.99e-01 100.0% 90.8%
2o8lA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 43.0 3.65e-01 75.4% 80.2%
2wxwA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.60 41.0 3.06e-01 72.1% 55.1%
2cocA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 51.0 4.41e-01 100.0% 83.0%
2hlcA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 40.0 3.42e-01 72.1% 78.8%
3tk9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 40.0 3.37e-01 72.1% 76.6%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 46.0 3.70e-01 100.0% 42.7%
2d9vA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 50.0 4.22e-01 100.0% 84.3%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 50.0 4.28e-01 100.0% 81.0%
1bakA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 48.0 3.98e-01 100.0% 65.5%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 47.0 4.18e-01 100.0% 63.0%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 49.0 3.89e-01 100.0% 74.8%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 39.0 2.73e-01 72.1% 53.2%
1h10A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 50.0 4.02e-01 100.0% 74.4%
5yjlD01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 40.0 3.07e-01 75.4% 73.2%
7ctpA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 49.0 3.96e-01 100.0% 85.0%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.56 48.0 3.35e-01 100.0% 30.0%
3ijfX00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.55 46.0 3.73e-01 95.1% 65.0%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 45.0 3.41e-01 100.0% 84.2%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 43.0 3.27e-01 100.0% 51.3%
2n6eA00 3.40.1530.20 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) 0.54 44.0 3.79e-01 100.0% 68.2%
2qeaB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 37.0 2.86e-01 75.4% 69.9%
4ybnB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 37.0 2.70e-01 77.0% 62.9%
2vldB01 2.70.180.20 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › 0.53 45.0 3.72e-01 100.0% 68.6%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 41.0 3.12e-01 100.0% 33.8%
2ok5A02 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 45.0 3.09e-01 98.4% 65.3%
3imhA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 40.0 2.59e-01 90.2% 16.6%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 36.0 3.18e-01 77.0% 73.5%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 2.79e-01 100.0% 86.9%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.51 44.0 4.34e-01 100.0% 91.2%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 38.0 3.99e-01 96.7% 89.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.51 36.0 3.85e-01 96.7% 95.8%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 38.0 4.04e-01 96.7% 98.0%
3db0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 37.0 3.07e-01 100.0% 41.1%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 37.0 3.59e-01 100.0% 71.0%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3926830 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.72 58.0 4.80e-01 88.5% 58.2%
3479744 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 49.0 3.00e-01 78.7% 21.6%
3276495 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.66 55.0 3.44e-01 100.0% 16.2%
3684619 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.65 55.0 3.43e-01 100.0% 92.5%
4028717 219.1.1.97 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CEPT76_peptidase 0.65 53.0 3.72e-01 100.0% 27.3%
4041829 219.1.1.21 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 0.65 55.0 3.77e-01 100.0% 30.2%
3203375 219.1.1.129 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF7770 0.65 58.0 4.52e-01 100.0% 47.7%
3455944 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.65 55.0 4.15e-01 100.0% 95.6%
4418620 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 47.0 2.58e-01 85.2% 12.0%
4302902 6.1.1.4 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin 0.61 52.0 4.16e-01 100.0% 90.8%
2570822 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.61 48.0 3.68e-01 100.0% 37.2%
None — 0.61 46.0 2.59e-01 85.2% 15.7%
3392702 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.60 47.0 3.28e-01 100.0% 25.1%
4535258 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.60 52.0 4.34e-01 100.0% 90.9%
4558605 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.59 52.0 4.19e-01 100.0% 93.3%
5029658 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.59 51.0 4.28e-01 100.0% 80.0%
3385461 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.59 49.0 3.81e-01 100.0% 40.7%
4638794 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.59 51.0 4.07e-01 100.0% 71.2%
3717564 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 51.0 4.01e-01 100.0% 68.1%
3741166 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 51.0 4.13e-01 100.0% 80.0%
3393541 10.1.1.63 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Methyltransf_FA 0.58 51.0 3.76e-01 100.0% 73.3%
4019476 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 3.79e-01 100.0% 72.3%
4976853 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.58 50.0 4.07e-01 100.0% 76.7%
3475602 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 50.0 4.15e-01 100.0% 84.3%
3507883 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 50.0 4.13e-01 100.0% 77.4%
5030334 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 40.0 3.41e-01 100.0% 41.8%
5055513 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.58 49.0 4.02e-01 100.0% 75.0%
4948685 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.57 49.0 4.08e-01 100.0% 78.8%
3255850 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 50.0 3.86e-01 100.0% 60.0%
3486509 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 49.0 4.06e-01 100.0% 76.5%
3500872 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 50.0 4.20e-01 100.0% 82.9%
3967347 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.56 47.0 4.42e-01 100.0% 77.3%
3923801 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 49.0 4.29e-01 100.0% 86.3%
3740052 220.1.1.57 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_20 0.56 49.0 3.96e-01 100.0% 74.2%
4261492 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.56 44.0 3.47e-01 100.0% 40.0%
3897826 220.1.1.161 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 0.56 47.0 3.94e-01 100.0% 73.0%
3270570 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 48.0 3.98e-01 100.0% 73.0%
3807010 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 47.0 3.69e-01 100.0% 61.4%
3838919 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.55 46.0 3.67e-01 100.0% 95.7%
5039819 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.55 46.0 3.72e-01 100.0% 70.0%
5000207 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.54 47.0 3.79e-01 100.0% 68.0%
3270288 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 48.0 4.08e-01 100.0% 81.0%
5034165 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.54 47.0 3.76e-01 100.0% 68.0%
1893314 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.54 47.0 3.75e-01 100.0% 66.7%
4003494 221.14.1.1 ↗ a+b two layers › beta-Grasp › TAR DNA-binding protein 43 N-terminal domain › TAR DNA-binding protein 43 N-terminal domain › TDP43_N 0.54 42.0 3.73e-01 88.5% 97.9%
4938263 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.54 46.0 3.74e-01 100.0% 69.6%
4458765 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.54 47.0 3.77e-01 100.0% 68.0%
4965160 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.54 44.0 3.97e-01 100.0% 92.6%
4497415 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.53 45.0 3.67e-01 100.0% 68.0%
4994614 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.53 45.0 3.64e-01 100.0% 68.0%
4679625 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 38.0 3.85e-01 100.0% 81.7%
4467867 3784.1.1.0 ↗ a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related 0.52 44.0 3.46e-01 100.0% 55.2%
5073193 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.52 44.0 3.64e-01 100.0% 71.7%
4931033 220.5.1.1 ↗ beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N 0.52 43.0 3.55e-01 100.0% 68.0%
3620554 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 44.0 3.87e-01 100.0% 65.3%
3293481 861.1.1.1 ↗ a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein › Mago_nashi 0.51 35.0 2.85e-01 82.0% 36.0%
3924377 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 38.0 4.01e-01 98.4% 92.7%
3238405 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 38.0 4.02e-01 96.7% 92.7%