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NC_041963.1__YP_009604281.1__FDH88_gp42__00042

Bact-Vir

NC_041963.1__YP_009604281.1__FDH88_gp42__00042

Identity

Accession:
NC_041963 ↗
Kingdom:
phage

Quality

82.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-70
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qy9A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.52 45.0 3.49e-01 100.0% 46.0%
7vqxR01 4.10.1240.10 Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain 0.52 35.0 3.31e-01 73.5% 56.0%
6twjA02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.52 42.0 3.01e-01 92.6% 42.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4475746 1.1.9.33 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_NSUN2 0.64 56.0 5.49e-01 100.0% 94.7%
4564845 1.1.9.33 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_NSUN2 0.64 56.0 5.05e-01 100.0% 74.7%
5027930 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.58 47.0 3.37e-01 92.6% 45.9%
3213567 390.1.1.7 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_3 0.53 44.0 3.74e-01 97.1% 76.8%
3935069 389.1.2.0 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.51 35.0 3.48e-01 73.5% 82.7%