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NC_041963.1__YP_009604291.1__FDH88_gp52__00052

Bact-Vir

NC_041963.1__YP_009604291.1__FDH88_gp52__00052

Identity

Accession:
NC_041963 ↗
Kingdom:
phage

Quality

70.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-88
PDB
CATH (91)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.81 60.0 5.98e-01 79.3% 75.3%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.81 59.0 5.99e-01 89.0% 76.8%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.79 62.0 5.61e-01 84.1% 72.3%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.78 57.0 6.13e-01 81.7% 91.2%
1cc8A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.78 56.0 5.92e-01 81.7% 86.1%
3im8A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.78 56.0 5.92e-01 92.7% 84.9%
1vi7A02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.76 52.0 5.55e-01 81.7% 81.7%
2bj3D02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.75 58.0 5.84e-01 81.7% 82.7%
2od4B01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 57.0 5.62e-01 82.9% 85.4%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.74 56.0 5.76e-01 80.5% 84.8%
3tqeA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.74 53.0 5.60e-01 91.5% 84.9%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.74 57.0 5.86e-01 84.1% 86.1%
2re1A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.74 52.0 5.44e-01 81.7% 82.4%
1yz7A02 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.74 60.0 5.81e-01 87.8% 86.7%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.73 57.0 5.59e-01 82.9% 77.5%
2nzcB00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.73 58.0 5.87e-01 84.1% 85.2%
2uvaG03 3.30.70.3320 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 55.0 4.99e-01 100.0% 60.2%
1q5yC00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.73 56.0 5.63e-01 81.7% 82.9%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.73 56.0 5.60e-01 84.1% 79.1%
2pd1A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 60.0 5.74e-01 90.2% 82.1%
6lxgA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.72 52.0 5.48e-01 75.6% 87.7%
2ahoB03 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.72 55.0 5.38e-01 81.7% 87.5%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.72 56.0 5.82e-01 96.3% 90.7%
4lowA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.72 59.0 5.92e-01 100.0% 88.1%
4aimA03 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.72 55.0 5.89e-01 92.7% 95.8%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 53.0 5.48e-01 81.7% 85.3%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 55.0 5.75e-01 92.7% 91.9%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.71 53.0 5.34e-01 79.3% 78.6%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.71 54.0 5.24e-01 81.7% 73.3%
2x3gA00 3.30.70.1910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 57.0 5.06e-01 92.7% 61.2%
7qh2C03 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 58.0 5.93e-01 89.0% 97.4%
5llwA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.70 58.0 4.94e-01 91.5% 67.9%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.70 64.0 5.01e-01 100.0% 55.7%
2mzwA01 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.70 54.0 5.55e-01 82.9% 88.2%
3u1kB04 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.70 54.0 5.75e-01 92.7% 95.8%
2axyA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.70 55.0 5.86e-01 92.7% 97.2%
2go8A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 50.0 5.27e-01 86.6% 83.8%
5suhA02 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.70 63.0 5.88e-01 100.0% 85.4%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.70 53.0 5.37e-01 96.3% 81.7%
2dt9A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 53.0 5.44e-01 81.7% 84.8%
2khdA00 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 57.0 5.23e-01 96.3% 68.5%
2y1rK00 3.30.70.1950 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 48.0 4.69e-01 95.1% 65.2%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 53.0 4.63e-01 84.1% 62.0%
5lt5A02 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.68 62.0 5.75e-01 100.0% 85.3%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 52.0 5.26e-01 81.7% 84.0%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.68 52.0 5.38e-01 81.7% 87.0%
1bccB01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.68 61.0 4.51e-01 100.0% 46.7%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 56.0 5.57e-01 89.0% 91.8%
4nohA01 3.30.70.3060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 47.0 5.02e-01 95.1% 84.5%
1vdhA01 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.68 56.0 4.94e-01 91.5% 71.1%
1utaA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.67 50.0 5.20e-01 84.1% 85.7%
3ungC03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.67 55.0 4.67e-01 89.0% 57.1%
3tviA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.66 59.0 4.77e-01 100.0% 91.8%
2p92A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.66 54.0 5.15e-01 100.0% 77.9%
2a6mA00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.65 53.0 4.62e-01 91.5% 65.4%
2qsrA01 3.90.1150.50 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain 0.65 52.0 4.27e-01 100.0% 46.5%
1ry9A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.65 58.0 4.95e-01 100.0% 69.9%
2rioA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 45.0 4.57e-01 81.7% 72.0%
2qyxB01 3.30.70.1360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like 0.65 57.0 5.14e-01 95.1% 71.6%
8b6jb01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.65 57.0 4.30e-01 100.0% 47.8%
4dmzA02 3.30.70.2880 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 54.0 4.59e-01 93.9% 55.5%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.65 52.0 5.21e-01 86.6% 89.0%
3cgiA00 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.65 57.0 5.12e-01 100.0% 71.4%
2ifxA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 54.0 5.33e-01 91.5% 88.6%
1q2lA03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.65 56.0 4.14e-01 100.0% 40.9%
3fotA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.64 52.0 3.78e-01 90.2% 79.6%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 47.0 4.85e-01 81.7% 84.2%
2k3iA01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 55.0 5.52e-01 96.3% 94.1%
4x0qA03 3.30.70.370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 51.0 4.34e-01 93.9% 51.0%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.64 48.0 4.32e-01 93.9% 57.9%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.64 51.0 4.92e-01 93.9% 76.8%
1wjwA01 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.63 48.0 4.78e-01 81.7% 100.0%
2dgxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 48.0 4.90e-01 92.7% 85.0%
2q5wE00 3.90.1170.40 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit 0.63 55.0 4.59e-01 93.9% 74.5%
1lxnA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 45.0 4.25e-01 79.3% 64.3%
2yweA04 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 51.0 4.59e-01 92.7% 82.5%
1x9zA02 3.30.1370.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain 0.59 45.0 4.41e-01 81.7% 75.3%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.59 41.0 4.06e-01 82.9% 69.0%
1x60A01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.59 43.0 4.56e-01 93.9% 90.3%
2dy1A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.58 44.0 4.59e-01 84.1% 89.5%
4anoA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.58 52.0 3.88e-01 100.0% 57.4%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 44.0 3.77e-01 82.9% 82.0%
7kjhC01 2.60.40.2860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 51.0 4.49e-01 98.8% 97.6%
4yhxA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 48.0 3.99e-01 93.9% 53.2%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.56 49.0 4.13e-01 100.0% 90.4%
4o1pD02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.56 49.0 3.54e-01 100.0% 51.6%
3d7aA01 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.56 42.0 3.66e-01 84.1% 66.9%
3akjA01 3.30.200.120 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.55 38.0 3.95e-01 85.4% 79.7%
5xuhA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.55 39.0 3.39e-01 74.4% 63.2%
2mz0A00 3.30.30.10 Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like 0.53 34.0 3.94e-01 73.2% 100.0%
2qmlA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 37.0 2.92e-01 80.5% 69.4%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5011372 306.6.1.0 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like 0.80 68.0 6.47e-01 100.0% 78.9%
4502232 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.79 59.0 6.05e-01 79.3% 91.3%
4990535 305.2.1.2 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › DUF2067 0.78 55.0 6.07e-01 79.3% 92.3%
4130677 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.78 56.0 6.02e-01 81.7% 88.6%
5014008 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.78 58.0 6.32e-01 78.0% 98.5%
3755164 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.77 61.0 6.38e-01 91.5% 93.3%
4959437 304.162.1.2 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › FLAD1_M 0.77 57.0 6.40e-01 87.8% 100.0%
5065393 304.5.1.1 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › P-II 0.77 54.0 5.00e-01 80.5% 58.3%
4998406 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.77 60.0 6.14e-01 82.9% 85.0%
4943420 3501.1.1.2 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › DUF2067 0.77 57.0 6.15e-01 79.3% 91.4%
5001014 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.77 59.0 5.88e-01 81.7% 80.0%
3573006 327.11.2.54 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_5 0.77 58.0 6.03e-01 80.5% 92.0%
3847407 327.11.2.23 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_8 0.76 57.0 5.68e-01 97.6% 76.5%
4223798 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.76 59.0 5.70e-01 81.7% 75.6%
5056106 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.76 58.0 5.74e-01 81.7% 77.3%
5051000 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.76 58.0 5.85e-01 81.7% 80.7%
4955435 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.76 57.0 5.96e-01 79.3% 86.7%
4976823 305.2.1.0 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.76 54.0 5.68e-01 78.0% 82.7%
3532818 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.75 57.0 5.81e-01 91.5% 82.5%
4976949 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.75 58.0 5.74e-01 97.6% 78.8%
4011868 327.16.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.75 56.0 5.84e-01 84.1% 86.7%
3948181 304.54.1.0 a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like 0.75 61.0 6.40e-01 100.0% 98.6%
4120122 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.75 58.0 5.60e-01 81.7% 75.6%
2879783 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.75 55.0 5.73e-01 81.7% 85.3%
4973817 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.75 57.0 5.50e-01 91.5% 71.6%
3210821 327.16.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.74 55.0 5.78e-01 89.0% 86.7%
5058967 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.74 56.0 5.80e-01 82.9% 86.7%
3956508 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.74 59.0 6.02e-01 89.0% 87.5%
5052687 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.74 54.0 5.61e-01 78.0% 84.0%
4033935 304.8.1.22 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.74 55.0 5.80e-01 79.3% 90.7%
4940284 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.73 56.0 5.88e-01 81.7% 92.0%
3383879 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.73 55.0 5.69e-01 79.3% 93.3%
4143020 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.73 64.0 4.47e-01 98.8% 50.0%
3602523 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.72 58.0 5.75e-01 97.6% 82.4%
3529971 327.11.2.18 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DTX3L_KH-like 0.72 56.0 5.73e-01 84.1% 97.5%
4991207 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.72 60.0 5.83e-01 96.3% 81.1%
3974776 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.72 54.0 5.65e-01 79.3% 88.0%
3218069 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.72 53.0 5.77e-01 78.0% 100.0%
4439160 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.72 52.0 5.78e-01 76.8% 96.9%
4141111 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.71 52.0 5.43e-01 76.8% 89.3%
5035849 3501.1.1.0 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 0.71 53.0 5.43e-01 89.0% 83.5%
3650582 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 53.0 5.68e-01 79.3% 98.6%
3271101 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.71 57.0 5.83e-01 92.7% 90.0%
4643972 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.71 54.0 5.19e-01 81.7% 74.2%
3877940 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.71 53.0 5.63e-01 79.3% 98.6%
4196765 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 53.0 5.63e-01 81.7% 94.3%
4217144 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.70 58.0 5.89e-01 89.0% 93.8%
5047006 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.70 53.0 4.84e-01 90.2% 60.9%
4599652 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.70 52.0 5.30e-01 79.3% 90.0%
4929139 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.70 60.0 5.81e-01 95.1% 84.4%
4154765 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.69 55.0 5.31e-01 87.8% 85.3%
4682115 304.28.1.4 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.69 53.0 5.16e-01 91.5% 75.6%
3163632 3313.1.1.1 a+b two layers › Uncharacterized protein VC_A0919 › Uncharacterized protein VC_A0919 › Uncharacterized protein VC_A0919 › DUF406 0.69 59.0 5.99e-01 97.6% 97.5%
3266841 304.8.1.22 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.69 56.0 5.58e-01 97.6% 84.7%
4589697 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.69 56.0 5.65e-01 89.0% 90.0%
4938351 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 51.0 5.45e-01 92.7% 91.4%
1873954 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.69 53.0 5.07e-01 90.2% 71.6%
3317095 304.9.1.122 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › bHLH-TF_ACT-like_plant 0.69 54.0 5.76e-01 92.7% 100.0%
5004030 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 58.0 5.57e-01 93.9% 80.0%
4129360 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.68 51.0 5.28e-01 79.3% 89.3%
4186587 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 52.0 5.26e-01 81.7% 87.5%
5045299 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.68 52.0 4.50e-01 91.5% 52.3%
4959212 131.1.1.3 alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.68 54.0 3.98e-01 87.8% 88.0%
5013346 241.1.1.30 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 0.68 60.0 4.99e-01 97.6% 68.6%
5048300 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 53.0 4.86e-01 89.0% 65.7%
4154211 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.67 58.0 5.65e-01 95.1% 85.6%
5003605 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.67 48.0 5.04e-01 93.9% 82.7%
4496232 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.67 56.0 5.69e-01 90.2% 93.8%
5045407 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.67 60.0 5.13e-01 100.0% 73.1%
3942499 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 47.0 5.03e-01 79.3% 87.1%
3958901 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 55.0 5.51e-01 92.7% 88.2%
3165967 3313.1.1.1 a+b two layers › Uncharacterized protein VC_A0919 › Uncharacterized protein VC_A0919 › Uncharacterized protein VC_A0919 › DUF406 0.66 56.0 5.47e-01 96.3% 86.7%
3738385 304.24.1.3 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III 0.66 50.0 4.98e-01 81.7% 78.8%
3425342 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 49.0 5.11e-01 81.7% 94.7%
5054303 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.65 52.0 5.31e-01 95.1% 91.3%
3720272 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.65 52.0 4.86e-01 86.6% 74.0%
3766383 304.48.1.6 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A 0.65 53.0 4.74e-01 91.5% 75.0%
4975506 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.65 48.0 5.01e-01 79.3% 86.7%
4977203 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.64 51.0 5.00e-01 90.2% 80.0%
5068190 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.64 46.0 4.99e-01 79.3% 98.5%
3365716 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 56.0 5.58e-01 100.0% 97.6%
3655839 207.11.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.64 56.0 4.37e-01 98.8% 56.1%
3182879 304.11.1.2 a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › SAT 0.63 50.0 5.10e-01 89.0% 88.7%
3666577 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.63 56.0 5.29e-01 100.0% 87.9%
3660837 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 56.0 5.58e-01 100.0% 96.5%
4993425 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.62 51.0 3.87e-01 91.5% 93.2%
4977318 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 50.0 4.92e-01 90.2% 83.3%
4970273 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.62 54.0 5.31e-01 98.8% 90.0%
3464795 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.62 49.0 4.40e-01 87.8% 64.2%
1211839 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.62 50.0 4.83e-01 93.9% 77.1%
4946212 4014.1.1.1 a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV 0.62 54.0 4.21e-01 100.0% 44.9%
3426902 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 53.0 5.12e-01 98.8% 92.6%
3165297 304.55.2.1 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › Y1_Tnp 0.61 52.0 4.50e-01 97.6% 66.7%
3357573 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 49.0 4.48e-01 89.0% 68.2%
3250936 304.15.1.0 a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain 0.57 43.0 4.51e-01 91.5% 95.7%
4601283 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.57 44.0 4.02e-01 92.7% 61.8%
4418704 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.55 48.0 3.94e-01 97.6% 53.5%
4301888 213.1.1.57 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › BCCIP 0.52 43.0 3.32e-01 100.0% 72.0%