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NC_041964.1__YP_009604328.1__FDH89_gp28__00028

Bact-Vir

NC_041964.1__YP_009604328.1__FDH89_gp28__00028

Identity

Accession:
NC_041964 ↗
Kingdom:
phage

Quality

80.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-195
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vzbB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 37.0 3.91e-01 95.7% 72.5%
3mk6B01 3.30.420.510 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.56 24.0 2.66e-01 87.2% 47.1%
1yo7A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.53 34.0 4.24e-01 95.2% 100.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3544151 603.2.1.0 alpha bundles › STAT-like › STAT › STAT 0.61 30.0 3.08e-01 98.9% 47.8%
3852419 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.56 31.0 3.06e-01 96.8% 51.5%
3617645 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.53 31.0 1.95e-01 89.8% 10.1%
3281355 304.12.1.12 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › GDH_ACT2 0.53 28.0 3.54e-01 77.0% 86.7%
3218104 601.1.2.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.52 34.0 4.12e-01 97.3% 99.2%
5050213 192.2.1.87 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ATP-synt_D 0.51 33.0 3.30e-01 98.4% 62.1%