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NC_041968.1__YP_009604635.1__FDH93_gp008__00008
Bact-VirNC_041968.1__YP_009604635.1__FDH93_gp008__00008
Identity
- Accession:
- NC_041968 ↗
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Vandenendeviridae›
Nankokuvirus›
Pseudomonas_phage_vB_PaeM_G1
TaxID: 1983539
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-128
Domain cluster:
rep: NC_049851.1__YP_009904719.1__H1O17_gp341__00341__D231-342
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5e37A02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.57 | 31.0 | 3.66e-01 | 79.7% | 76.7% |
| 1f7uA02 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.52 | 36.0 | 3.65e-01 | 88.3% | 71.2% |
| 3p9dG01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.52 | 46.0 | 3.75e-01 | 100.0% | 82.2% |
| 4gkfA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.51 | 45.0 | 4.38e-01 | 100.0% | 95.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3432076 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.53 | 39.0 | 4.22e-01 | 97.7% | 91.8% |
| 3676416 | 320.4.1.3 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB | 0.52 | 41.0 | 4.24e-01 | 100.0% | 90.8% |
| 5013299 | 148.1.3.407 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF2391 | 0.51 | 33.0 | 3.44e-01 | 100.0% | 71.3% |
D2
high
residues 137-225
Domain cluster:
rep: MT108730.1__QIQ63914.1__Epa24_00001__00001__D20-88