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NC_041971.1__YP_009605131.1__FDH96_gp116__00141
Bact-VirNC_041971.1__YP_009605131.1__FDH96_gp116__00141
Identity
- Accession:
- NC_041971 ↗
- Kingdom:
- phage
Quality
62.9
mean pLDDT
Taxonomy
TaxID: 1034115
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-55
D2
high
residues 71-162
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.67 | 58.0 | 4.90e-01 | 95.7% | 71.1% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 43.0 | 4.73e-01 | 83.7% | 86.7% |
| 4ikbA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 49.0 | 4.43e-01 | 90.2% | 83.7% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.59 | 41.0 | 3.26e-01 | 78.3% | 35.7% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 50.0 | 3.89e-01 | 96.7% | 86.5% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.57 | 46.0 | 4.00e-01 | 90.2% | 59.1% |
| 4k00A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 40.0 | 3.53e-01 | 73.9% | 95.6% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.55 | 47.0 | 4.47e-01 | 95.7% | 89.3% |
| 1njkA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 38.0 | 3.44e-01 | 73.9% | 100.0% |
| 1zhxA03 | 2.40.160.120 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 42.0 | 3.30e-01 | 100.0% | 39.8% |
| 1lo7A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 39.0 | 3.43e-01 | 76.1% | 99.3% |
| 3r87A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 37.0 | 3.36e-01 | 73.9% | 97.7% |
| 6yfiB01 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.52 | 47.0 | 4.15e-01 | 98.9% | 83.0% |
| 2zylA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.52 | 40.0 | 3.02e-01 | 82.6% | 74.2% |
| 2egjA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 35.0 | 3.24e-01 | 72.8% | 99.2% |
| 5m8cB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 39.0 | 2.67e-01 | 100.0% | 22.7% |
| 2pzhA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.50 | 35.0 | 3.12e-01 | 71.7% | 98.5% |
| 3o0lA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 35.0 | 3.42e-01 | 91.3% | 63.3% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4966376 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.66 | 51.0 | 3.43e-01 | 81.5% | 34.2% |
| 3698492 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.65 | 57.0 | 5.15e-01 | 96.7% | 74.4% |
| 3702663 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.63 | 47.0 | 4.07e-01 | 98.9% | 50.3% |
| 3806012 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.61 | 49.0 | 3.29e-01 | 91.3% | 23.4% |
| 2882170 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.60 | 43.0 | 3.12e-01 | 73.9% | 36.4% |
| 4433752 | 5.1.3.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neuraminidase | 0.60 | 47.0 | 3.32e-01 | 85.9% | 28.0% |
| 3606265 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.59 | 53.0 | 3.34e-01 | 100.0% | 29.6% |
| 5044247 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.59 | 51.0 | 3.92e-01 | 96.7% | 88.4% |
| 5003610 | 3153.1.1.0 ↗ | a+b two layers › PipX › PipX › PipX | 0.58 | 43.0 | 4.29e-01 | 81.5% | 75.8% |
| 3392689 | 11.1.1.538 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CHRD | 0.57 | 49.0 | 4.41e-01 | 95.7% | 90.0% |
| 4864643 | 5.1.13.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain of DCAF15 › DCAF15_WD40 | 0.57 | 49.0 | 3.91e-01 | 95.7% | 47.6% |
| 4280513 | 222.2.1.1 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Insertion domain in thioesterase › Insertion domain in thioesterase › FAS1_thioest_ins | 0.56 | 42.0 | 4.05e-01 | 81.5% | 95.5% |
| 4991712 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.56 | 42.0 | 3.47e-01 | 100.0% | 45.0% |
| 3547225 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 48.0 | 3.07e-01 | 100.0% | 19.6% |
| 3198929 | 331.4.1.3 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › AdenylateSensor | 0.55 | 41.0 | 3.56e-01 | 78.3% | 61.6% |
| 3711018 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 49.0 | 3.20e-01 | 97.8% | 27.4% |
| 4265807 | 77.1.1.4 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Chitin_bind_4 | 0.54 | 36.0 | 4.01e-01 | 100.0% | 90.0% |
| 3490456 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 43.0 | 3.73e-01 | 87.0% | 57.2% |
| 3188943 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 47.0 | 3.11e-01 | 100.0% | 27.7% |
| 3594267 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 4.13e-01 | 90.2% | 99.1% |
| 3640593 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.53 | 47.0 | 3.08e-01 | 100.0% | 29.2% |
| 3447505 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.52 | 45.0 | 3.47e-01 | 100.0% | 80.0% |
| 3813186 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 47.0 | 3.01e-01 | 100.0% | 20.9% |
| 3374035 | 5.1.5.86 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 | 0.52 | 43.0 | 2.95e-01 | 94.6% | 27.5% |
| 3511681 | 883.1.1.27 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › DUF7061 | 0.51 | 36.0 | 2.75e-01 | 72.8% | 69.6% |
| 3266626 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.51 | 42.0 | 4.11e-01 | 88.0% | 90.9% |
| 3646854 | 7026.1.1.13 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › Hobbit | 0.50 | 44.0 | 3.39e-01 | 94.6% | 59.8% |