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NC_041976.1__YP_009606446.1__FDI01_gp019__00019
Bact-VirNC_041976.1__YP_009606446.1__FDI01_gp019__00019
Identity
- Accession:
- NC_041976 ↗
- Kingdom:
- phage
Quality
87.3
mean pLDDT
Taxonomy
TaxID: 1296658
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-101
Domain cluster:
rep: Bro25__YP_009702174__Heliothis_virescens_ascovirus_3g__1246651__D4-128
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sbxA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.65 | 54.0 | 5.30e-01 | 100.0% | 84.0% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.64 | 36.0 | 3.41e-01 | 85.4% | 43.8% |
| 3hh0A01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.63 | 38.0 | 4.27e-01 | 72.9% | 79.2% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.63 | 38.0 | 3.46e-01 | 72.9% | 45.2% |
| 1l8rA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.63 | 53.0 | 5.23e-01 | 100.0% | 89.1% |
| 4hplA00 | 3.10.260.40 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › BCL-6 corepressor, PCGF1 binding domain | 0.61 | 55.0 | 5.23e-01 | 100.0% | 86.7% |
| 4r24B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.61 | 39.0 | 4.11e-01 | 86.5% | 71.8% |
| 3tg9A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.61 | 50.0 | 3.50e-01 | 89.6% | 82.0% |
| 2kvvA00 | 1.10.1660.60 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Putative excisionased domain DUF1233 | 0.58 | 38.0 | 4.15e-01 | 74.0% | 83.3% |
| 1ci9A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.57 | 45.0 | 3.12e-01 | 88.5% | 71.6% |
| 2wb6A00 | 3.90.1150.90 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.57 | 35.0 | 3.37e-01 | 94.8% | 51.8% |
| 5i0hA02 | 1.20.5.4820 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 39.0 | 4.37e-01 | 87.5% | 100.0% |
| 3im8A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.51 | 35.0 | 3.83e-01 | 87.5% | 91.8% |
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.50 | 44.0 | 4.22e-01 | 99.0% | 85.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.82 | 66.0 | 6.30e-01 | 100.0% | 73.6% |
| 3968916 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.81 | 64.0 | 6.19e-01 | 97.9% | 75.2% |
| 1790169 | 101.1.9.7 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Baculo_PEP_N | 0.76 | 62.0 | 5.99e-01 | 99.0% | 77.4% |
| 4033119 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.75 | 62.0 | 6.14e-01 | 96.9% | 84.0% |
| 3798434 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.72 | 55.0 | 5.24e-01 | 81.2% | 70.8% |
| 3629193 | 101.1.9.23 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TdIF1_2nd | 0.71 | 55.0 | 5.15e-01 | 81.2% | 69.6% |
| 3192917 | 101.1.9.37 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › CRC_subunit | 0.67 | 59.0 | 5.18e-01 | 100.0% | 66.7% |
| 3238512 | 101.1.9.23 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TdIF1_2nd | 0.67 | 51.0 | 4.85e-01 | 81.2% | 70.0% |
| 3731164 | 101.1.9.37 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › CRC_subunit | 0.67 | 58.0 | 5.52e-01 | 100.0% | 80.7% |
| 3525074 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.66 | 55.0 | 5.67e-01 | 94.8% | 95.6% |
| 3480611 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.65 | 55.0 | 5.57e-01 | 96.9% | 92.6% |
| 3888996 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.65 | 54.0 | 5.43e-01 | 100.0% | 92.6% |
| 3480621 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.64 | 54.0 | 5.43e-01 | 100.0% | 93.7% |
| 3529465 | 101.1.9.4 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ski_Sno | 0.62 | 54.0 | 5.31e-01 | 97.9% | 88.6% |
| 4008588 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.62 | 57.0 | 5.42e-01 | 100.0% | 88.2% |
| 4223228 | 101.1.9.21 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Swi6_N | 0.57 | 45.0 | 4.64e-01 | 100.0% | 90.0% |
| 5059362 | 4271.1.1.3 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like › DNA_primase_lrg_N | 0.53 | 43.0 | 3.33e-01 | 100.0% | 37.4% |
| 5036316 | 310.1.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N | 0.51 | 36.0 | 3.70e-01 | 85.4% | 75.8% |
D2
high
residues 174-266
Domain cluster:
rep: MH727550.1__AYB69465.1__JUICEBOX_36__00036__D157-238
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03374.20 best | ANT | 103.0 | 1.60e-29 | 100.0% | 79.6% |