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NC_041976.1__YP_009606461.1__FDI01_gp034__00034
Bact-VirNC_041976.1__YP_009606461.1__FDI01_gp034__00034
Identity
- Accession:
- NC_041976 ↗
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Taxonomy
TaxID: 1296658
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-74
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 30.0 | 3.67e-01 | 87.7% | 73.3% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 37.0 | 3.98e-01 | 95.9% | 74.6% |
| 1fumA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 42.0 | 2.89e-01 | 86.3% | 99.0% |
| 1x0tA02 | 6.20.50.20 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.54 | 28.0 | 3.40e-01 | 90.4% | 77.8% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 32.0 | 3.42e-01 | 97.3% | 67.7% |
| 7rpyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 46.0 | 4.13e-01 | 98.6% | 95.1% |
| 3rm5B01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 42.0 | 2.88e-01 | 93.2% | 79.3% |
| 1nnwB00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.51 | 40.0 | 2.81e-01 | 87.7% | 88.4% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3181317 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.70 | 43.0 | 4.22e-01 | 95.9% | 58.2% |
| 4999817 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 36.0 | 4.52e-01 | 89.0% | 86.7% |
| 3221229 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 37.0 | 4.53e-01 | 94.5% | 95.6% |
| 4962338 | 375.1.1.234 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_PaaD | 0.56 | 31.0 | 4.02e-01 | 89.0% | 100.0% |
| 3247046 | 377.1.1.83 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF26040 | 0.55 | 31.0 | 3.92e-01 | 91.8% | 100.0% |
| 3933561 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 29.0 | 2.57e-01 | 90.4% | 33.3% |
| 5079381 | 2003.1.3.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_binding_3 | 0.54 | 40.0 | 2.81e-01 | 82.2% | 71.5% |
| 182717 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.52 | 42.0 | 2.88e-01 | 93.2% | 79.8% |
| 3787175 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.52 | 45.0 | 3.76e-01 | 95.9% | 61.6% |
| 3696153 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.51 | 39.0 | 2.65e-01 | 86.3% | 58.7% |
| 4297683 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.50 | 39.0 | 2.51e-01 | 90.4% | 41.1% |