Back to structures

NC_041978.1__YP_009606760.1__FDI03_gp092__00092

Bact-Vir

NC_041978.1__YP_009606760.1__FDI03_gp092__00092

Identity

Accession:
NC_041978 ↗
Kingdom:
phage

Quality

90.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-58
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gqhA02 4.10.80.40 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain 0.58 37.0 4.06e-01 74.1% 87.5%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4004294 3530.1.1.17 extended segments › Major vault protein (MVP) helical domain › Major vault protein (MVP) helical domain › Major vault protein (MVP) helical domain › Band_7 0.60 37.0 4.06e-01 94.4% 85.0%
3946358 3529.1.1.6 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Band_7 0.59 37.0 4.05e-01 94.4% 85.0%
3785100 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.58 40.0 2.43e-01 74.1% 28.5%
4993070 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 41.0 3.82e-01 81.5% 82.7%
3551490 387.1.1.10 few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › zf-GRF 0.54 39.0 4.03e-01 92.6% 86.0%
3504834 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 39.0 3.84e-01 94.4% 75.9%
4031029 219.1.1.51 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 0.51 40.0 2.97e-01 94.4% 47.4%