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NC_042014.1__YP_009612439.1__FDI41_gp60__00060

Bact-Vir

NC_042014.1__YP_009612439.1__FDI41_gp60__00060

Identity

Accession:
NC_042014 ↗
Kingdom:
phage

Quality

82.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-46
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ibcB00 3.30.70.1470 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Caspase-like 0.60 45.0 3.69e-01 80.0% 64.8%
1kl7A02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 49.0 3.15e-01 100.0% 88.4%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3620847 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.94 73.0 5.27e-01 100.0% 33.6%
3492158 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.92 71.0 5.49e-01 100.0% 41.1%
3340968 386.1.1.76 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met2 0.86 68.0 5.82e-01 97.8% 55.7%
3839206 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.71 56.0 4.79e-01 93.3% 70.0%
3467313 206.1.1.26 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Act-Frag_cataly 0.65 48.0 2.84e-01 80.0% 70.6%