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NC_042014.1__YP_009612446.1__FDI41_gp67__00067
Bact-VirNC_042014.1__YP_009612446.1__FDI41_gp67__00067
Identity
- Accession:
- NC_042014 ↗
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Berryhillviridae›
Jawnskivirus›
Arthrobacter_phage_Piccoletto
TaxID: 2024282
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-73
Domain cluster:
rep: NC_048101.1__YP_009815906.1__HOU56_gp02__00002__D5-81
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mfzA02 | 3.40.630.120 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › | 0.54 | 37.0 | 2.97e-01 | 71.8% | 77.6% |
| 7kx7A03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 43.0 | 3.14e-01 | 95.8% | 63.7% |
| 3u04A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.51 | 45.0 | 3.41e-01 | 100.0% | 82.6% |
| 3w1hA01 | 3.90.1150.110 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.50 | 36.0 | 2.72e-01 | 77.5% | 68.3% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4604112 | 213.1.1.8 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › HlyC | 0.65 | 46.0 | 3.59e-01 | 91.5% | 33.8% |
| 4943270 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 42.0 | 3.68e-01 | 77.5% | 52.7% |
| 4012816 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 40.0 | 3.41e-01 | 74.6% | 63.1% |
| 4898995 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.57 | 34.0 | 3.13e-01 | 78.9% | 46.7% |
| 4104300 | 2004.1.1.164 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc | 0.57 | 40.0 | 2.57e-01 | 74.6% | 20.3% |
| 3958234 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.56 | 35.0 | 3.55e-01 | 84.5% | 62.9% |
| 3608464 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 41.0 | 3.01e-01 | 78.9% | 42.6% |
| 5051060 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 39.0 | 3.12e-01 | 80.3% | 37.1% |
| 4004108 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.54 | 44.0 | 3.02e-01 | 88.7% | 86.0% |
| 3224109 | 221.1.1.67 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Plexin_RBD | 0.54 | 39.0 | 3.06e-01 | 80.3% | 48.8% |
| 3734580 | 101.1.2.535 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25889 | 0.54 | 37.0 | 2.95e-01 | 73.2% | 48.5% |
| 3591665 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 40.0 | 2.99e-01 | 78.9% | 52.4% |
| 3224634 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.52 | 47.0 | 2.94e-01 | 100.0% | 25.9% |
| 3937002 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 45.0 | 2.89e-01 | 95.8% | 55.9% |
| 3815772 | 109.4.1.1580 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N, HAT_PRP39_C | 0.52 | 38.0 | 2.23e-01 | 98.6% | 8.5% |
| 3931288 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.51 | 42.0 | 3.10e-01 | 97.2% | 74.4% |
| 3183690 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 44.0 | 3.52e-01 | 100.0% | 82.7% |
| None | — | 0.51 | 34.0 | 3.10e-01 | 88.7% | 52.7% | |
| 3983446 | 101.1.2.84 ↗ | alpha arrays › HTH › HTH › winged helix domain › CaiF_GrlA | 0.50 | 36.0 | 3.29e-01 | 87.3% | 55.0% |
| 4595166 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.50 | 42.0 | 3.09e-01 | 100.0% | 64.4% |
| 4836497 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.50 | 39.0 | 3.07e-01 | 91.5% | 70.9% |