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NC_042016.1__YP_009612594.1__FDI43_gp64__00064
Bact-VirNC_042016.1__YP_009612594.1__FDI43_gp64__00064
Identity
- Accession:
- NC_042016 ↗
- Kingdom:
- phage
Quality
80.0
mean pLDDT
Taxonomy
TaxID: 2024284
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-125
Domain cluster:
rep: MG603697.1__AUG88509.1__VPR_145__00145__D2-114
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10686.15 best | YAcAr | 62.9 | 2.60e-17 | 58.1% | 95.5% |
CATH (81)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7zp2C02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.70 | 58.0 | 5.38e-01 | 100.0% | 69.9% |
| 2wteA01 | 3.40.50.11700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 61.0 | 5.95e-01 | 100.0% | 87.7% |
| 7mi0A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.68 | 55.0 | 4.84e-01 | 100.0% | 58.6% |
| 5djsA03 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.68 | 58.0 | 5.20e-01 | 100.0% | 67.9% |
| 1up7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 57.0 | 5.57e-01 | 100.0% | 83.2% |
| 4pe5B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 55.0 | 4.96e-01 | 91.1% | 68.2% |
| 2rbgA00 | 3.40.50.11100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 58.0 | 5.84e-01 | 100.0% | 97.6% |
| 5cgzA00 | 3.40.50.10320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like | 0.65 | 59.0 | 4.74e-01 | 100.0% | 65.4% |
| 5t3uB00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.64 | 47.0 | 4.61e-01 | 100.0% | 70.7% |
| 1pzxB01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.64 | 46.0 | 4.64e-01 | 73.4% | 82.8% |
| 1tjyA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 54.0 | 5.04e-01 | 91.1% | 85.6% |
| 3lkbA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 53.0 | 4.81e-01 | 91.9% | 66.5% |
| 2qu7A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 53.0 | 5.18e-01 | 91.1% | 97.1% |
| 3i3oG00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 58.0 | 4.60e-01 | 100.0% | 55.1% |
| 6c5cA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 54.0 | 4.76e-01 | 92.7% | 86.8% |
| 3i45A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 52.0 | 4.67e-01 | 91.9% | 62.8% |
| 1g0nB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 57.0 | 4.52e-01 | 100.0% | 52.8% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 45.0 | 4.18e-01 | 74.2% | 87.9% |
| 4ospD00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 57.0 | 4.55e-01 | 100.0% | 57.1% |
| 5bq3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 53.0 | 4.92e-01 | 91.9% | 85.8% |
| 5c3mC01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 57.0 | 5.14e-01 | 100.0% | 86.8% |
| 4nqrA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 52.0 | 4.84e-01 | 91.1% | 72.3% |
| 4fe7A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 52.0 | 4.93e-01 | 91.1% | 82.2% |
| 4q6bA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 51.0 | 4.98e-01 | 91.1% | 82.1% |
| 4rweA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 53.0 | 4.91e-01 | 93.5% | 84.3% |
| 4wzzA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 53.0 | 4.87e-01 | 93.5% | 88.1% |
| 4da9B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 56.0 | 4.65e-01 | 100.0% | 63.0% |
| 6feaA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.61 | 51.0 | 4.45e-01 | 91.1% | 65.3% |
| 4nzpA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 52.0 | 5.04e-01 | 100.0% | 83.3% |
| 4ry8C02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 52.0 | 4.76e-01 | 93.5% | 81.3% |
| 4yrbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 51.0 | 4.34e-01 | 100.0% | 54.9% |
| 3l49A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 52.0 | 4.94e-01 | 93.5% | 94.6% |
| 3bblA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 51.0 | 4.88e-01 | 91.1% | 82.5% |
| 3d02A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 51.0 | 4.78e-01 | 91.9% | 90.2% |
| 1efaA03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 51.0 | 4.90e-01 | 91.9% | 81.1% |
| 3c3kA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 50.0 | 4.90e-01 | 91.1% | 93.5% |
| 4ydsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 53.0 | 4.42e-01 | 98.4% | 69.9% |
| 2rjoA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 52.0 | 4.65e-01 | 94.4% | 76.9% |
| 3k9cA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 50.0 | 4.83e-01 | 91.1% | 80.9% |
| 3brsA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 50.0 | 4.89e-01 | 91.1% | 84.3% |
| 3gv0A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 50.0 | 4.89e-01 | 91.1% | 86.5% |
| 1toaA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.60 | 44.0 | 4.33e-01 | 87.1% | 72.5% |
| 3hcwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 50.0 | 4.78e-01 | 91.9% | 81.8% |
| 4zjpA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 50.0 | 4.83e-01 | 93.5% | 91.0% |
| 6gt9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 50.0 | 4.51e-01 | 94.4% | 75.9% |
| 3k5wA01 | 3.40.50.10260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › YjeF N-terminal domain | 0.58 | 51.0 | 4.32e-01 | 96.0% | 95.1% |
| 4rsmA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 49.0 | 4.68e-01 | 93.5% | 88.0% |
| 2dr3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 52.0 | 4.25e-01 | 100.0% | 71.6% |
| 3qkwB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.58 | 44.0 | 3.99e-01 | 100.0% | 57.5% |
| 2w0mA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 49.0 | 4.15e-01 | 96.0% | 61.8% |
| 3vu9B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 49.0 | 4.34e-01 | 96.0% | 78.5% |
| 1wy5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 51.0 | 4.29e-01 | 100.0% | 68.2% |
| 4y7uA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.57 | 51.0 | 4.24e-01 | 100.0% | 91.5% |
| 1e8cB03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.57 | 45.0 | 4.33e-01 | 91.9% | 73.9% |
| 3qfhC02 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.57 | 47.0 | 3.42e-01 | 89.5% | 59.8% |
| 8dkrB01 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.57 | 49.0 | 4.01e-01 | 94.4% | 90.0% |
| 2dyuA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.56 | 49.0 | 3.80e-01 | 98.4% | 80.3% |
| 6l1kA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 47.0 | 4.20e-01 | 91.9% | 92.2% |
| 3ke8A01 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.56 | 46.0 | 4.78e-01 | 100.0% | 98.2% |
| 3nd5A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 48.0 | 4.54e-01 | 100.0% | 78.9% |
| 4cqbA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.55 | 47.0 | 3.58e-01 | 93.5% | 88.7% |
| 3k30A03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 41.0 | 4.03e-01 | 79.8% | 72.9% |
| 4d8tA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 40.0 | 4.25e-01 | 76.6% | 100.0% |
| 4zoqM00 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.55 | 39.0 | 2.91e-01 | 74.2% | 70.9% |
| 1gv4A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 40.0 | 3.67e-01 | 76.6% | 71.1% |
| 3nbkD00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 48.0 | 4.42e-01 | 100.0% | 74.8% |
| 5e5bA01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.55 | 47.0 | 4.31e-01 | 97.6% | 76.6% |
| 1w4bA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 42.0 | 3.51e-01 | 83.1% | 84.1% |
| 1tq8A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 46.0 | 4.65e-01 | 94.4% | 94.5% |
| 6fcxA01 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.54 | 47.0 | 3.68e-01 | 98.4% | 90.4% |
| 3ojcA01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 41.0 | 4.27e-01 | 100.0% | 88.0% |
| 1vhkA02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.53 | 47.0 | 4.33e-01 | 100.0% | 84.6% |
| 1l5jA04 | 3.30.499.10 | Alpha Beta › 2-Layer Sandwich › Aconitase; domain 3 › Aconitase, domain 3 | 0.52 | 41.0 | 4.12e-01 | 100.0% | 82.0% |
| 5e0sB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.52 | 37.0 | 3.13e-01 | 71.8% | 83.6% |
| 6kmoB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 44.0 | 3.27e-01 | 91.9% | 82.3% |
| 1jqlB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 46.0 | 4.50e-01 | 100.0% | 87.9% |
| 2ymbA00 | 3.30.870.30 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain | 0.52 | 44.0 | 4.16e-01 | 94.4% | 80.4% |
| 3i9v102 | 3.40.50.11540 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NADH-ubiquinone oxidoreductase 51kDa subunit | 0.52 | 46.0 | 4.08e-01 | 99.2% | 77.7% |
| 1xdpA03 | 3.30.870.10 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A | 0.51 | 43.0 | 3.82e-01 | 94.4% | 61.7% |
| 1lt7B00 | 3.20.20.330 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Homocysteine-binding-like domain | 0.51 | 44.0 | 3.24e-01 | 93.5% | 59.0% |
| 3bzcA03 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.51 | 44.0 | 4.40e-01 | 94.4% | 94.5% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3483595 | 7563.1.1.6 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › LSDAT_euk | 0.83 | 78.0 | 5.86e-01 | 100.0% | 58.2% |
| 3488655 | 7563.1.1.6 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › LSDAT_euk | 0.83 | 77.0 | 5.54e-01 | 100.0% | 57.3% |
| 3484695 | 7563.1.1.6 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › LSDAT_euk | 0.83 | 78.0 | 5.52e-01 | 100.0% | 56.4% |
| None | — | 0.82 | 76.0 | 5.58e-01 | 100.0% | 54.5% | |
| 4889382 | 109.3.1.167 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ion_trans, TRPM2 | 0.78 | 73.0 | 4.65e-01 | 100.0% | 34.0% |
| 3279475 | 7567.1.1.1 ↗ | a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L | 0.70 | 65.0 | 5.34e-01 | 100.0% | 60.0% |
| 4225183 | 7512.1.1.54 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Alg14 | 0.70 | 64.0 | 5.58e-01 | 100.0% | 77.3% |
| 1734342 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.69 | 61.0 | 5.90e-01 | 100.0% | 85.8% |
| 3618420 | 7512.1.1.54 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Alg14 | 0.68 | 62.0 | 5.17e-01 | 100.0% | 60.5% |
| 4572718 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.68 | 62.0 | 4.75e-01 | 100.0% | 58.2% |
| 4324425 | 7524.1.1.2 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh | 0.68 | 59.0 | 4.11e-01 | 100.0% | 29.1% |
| 2775294 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.68 | 55.0 | 4.55e-01 | 100.0% | 48.4% |
| 5060275 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.68 | 60.0 | 6.02e-01 | 99.2% | 95.3% |
| 4971828 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.67 | 61.0 | 5.92e-01 | 100.0% | 90.0% |
| 5023781 | 7567.1.1.1 ↗ | a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L | 0.67 | 61.0 | 5.18e-01 | 100.0% | 67.0% |
| 5043669 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.67 | 61.0 | 5.78e-01 | 100.0% | 90.3% |
| 4950847 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.66 | 60.0 | 5.45e-01 | 100.0% | 77.6% |
| 3958176 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 43.0 | 4.13e-01 | 73.4% | 56.6% |
| 4965301 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.65 | 59.0 | 5.87e-01 | 99.2% | 99.2% |
| 4613430 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.65 | 59.0 | 4.58e-01 | 100.0% | 67.4% |
| 4933886 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.65 | 53.0 | 4.71e-01 | 100.0% | 59.5% |
| 3612614 | 2007.1.2.28 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_A-cyclase_1 | 0.65 | 54.0 | 4.76e-01 | 90.3% | 64.9% |
| 3261893 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.65 | 59.0 | 5.92e-01 | 99.2% | 99.2% |
| 5045615 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.65 | 56.0 | 4.88e-01 | 100.0% | 62.7% |
| 3405122 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.65 | 54.0 | 4.41e-01 | 91.1% | 66.8% |
| 4149576 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.64 | 58.0 | 4.44e-01 | 100.0% | 57.2% |
| 4408871 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.64 | 54.0 | 4.76e-01 | 91.9% | 64.3% |
| 4950302 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.64 | 58.0 | 5.41e-01 | 100.0% | 80.0% |
| 5051624 | 2003.1.1.48 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N | 0.64 | 58.0 | 4.71e-01 | 100.0% | 57.0% |
| 2603013 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.63 | 47.0 | 3.52e-01 | 77.4% | 59.8% |
| 5039690 | 2005.1.1.16 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Diphthami_syn_2 | 0.63 | 57.0 | 4.66e-01 | 100.0% | 54.7% |
| 4951426 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.63 | 52.0 | 4.96e-01 | 91.9% | 81.3% |
| 4991014 | 2005.1.1.16 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Diphthami_syn_2 | 0.63 | 57.0 | 4.67e-01 | 100.0% | 55.1% |
| 3941787 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.63 | 52.0 | 5.18e-01 | 91.1% | 90.0% |
| 4611002 | 2005.1.1.35 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Citrate_ly_lig | 0.62 | 56.0 | 4.72e-01 | 100.0% | 70.7% |
| 4931998 | 2005.1.1.16 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Diphthami_syn_2 | 0.62 | 56.0 | 4.61e-01 | 100.0% | 53.9% |
| 1674673 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.62 | 52.0 | 5.07e-01 | 91.9% | 100.0% |
| 3907772 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.62 | 52.0 | 4.05e-01 | 91.9% | 44.3% |
| 3395584 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.62 | 57.0 | 5.23e-01 | 100.0% | 83.7% |
| 3279807 | 2003.1.1.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 | 0.62 | 47.0 | 3.62e-01 | 79.0% | 64.7% |
| 1913804 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.62 | 52.0 | 4.60e-01 | 91.1% | 66.7% |
| 3587036 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.62 | 52.0 | 5.14e-01 | 91.9% | 98.5% |
| 3946229 | 2003.1.1.26 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glyco_hydro_4 | 0.62 | 56.0 | 5.11e-01 | 100.0% | 87.3% |
| 2392259 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.62 | 52.0 | 5.12e-01 | 91.9% | 89.4% |
| 5020608 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.62 | 56.0 | 4.80e-01 | 100.0% | 63.6% |
| 5012532 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.61 | 52.0 | 4.34e-01 | 92.7% | 58.6% |
| 5030031 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.61 | 55.0 | 4.37e-01 | 100.0% | 87.3% |
| 4941460 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.61 | 52.0 | 4.18e-01 | 92.7% | 62.0% |
| 4982617 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.61 | 55.0 | 4.58e-01 | 100.0% | 80.4% |
| 4564199 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.61 | 54.0 | 4.44e-01 | 100.0% | 52.3% |
| 4944465 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.61 | 44.0 | 4.02e-01 | 74.2% | 83.7% |
| 3363215 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.61 | 51.0 | 4.58e-01 | 91.9% | 70.3% |
| 1836757 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.61 | 51.0 | 5.00e-01 | 91.9% | 88.8% |
| 3357529 | 2008.1.1.120 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HHH_5 | 0.60 | 39.0 | 3.25e-01 | 73.4% | 36.3% |
| 5036457 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.60 | 53.0 | 4.29e-01 | 100.0% | 73.1% |
| 4372595 | 2007.1.7.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › DHQ_synthase | 0.60 | 50.0 | 4.50e-01 | 92.7% | 86.7% |
| 1322981 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.60 | 51.0 | 5.07e-01 | 93.5% | 98.5% |
| 1296447 | 2007.1.2.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp | 0.60 | 51.0 | 4.88e-01 | 93.5% | 98.6% |
| 5000053 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.60 | 51.0 | 4.35e-01 | 96.0% | 60.9% |
| 4964530 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.60 | 52.0 | 4.15e-01 | 96.0% | 61.6% |
| None | — | 0.60 | 54.0 | 4.40e-01 | 100.0% | 76.5% | |
| 5003746 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.60 | 53.0 | 4.38e-01 | 100.0% | 71.3% |
| 3599117 | 2003.1.7.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like | 0.60 | 54.0 | 4.39e-01 | 100.0% | 73.9% |
| 4650998 | 3755.3.1.562 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Exonuc_VII_L | 0.59 | 46.0 | 3.68e-01 | 83.1% | 46.2% |
| 3971710 | 2.1.1.280 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Exonuc_VII_L | 0.59 | 46.0 | 4.25e-01 | 83.1% | 72.7% |
| 3758807 | 2007.2.3.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Syja_N | 0.59 | 49.0 | 3.75e-01 | 92.7% | 72.6% |
| 411928 | 7516.1.1.30 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › MGS_C,MGS_GT | 0.59 | 52.0 | 3.78e-01 | 100.0% | 56.8% |
| 5077272 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.59 | 50.0 | 4.12e-01 | 96.8% | 64.2% |
| 3958030 | 7510.1.1.0 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like | 0.59 | 50.0 | 3.53e-01 | 94.4% | 56.5% |
| 5040728 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.58 | 50.0 | 4.17e-01 | 96.8% | 67.4% |
| 5029279 | 2007.2.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like | 0.58 | 45.0 | 4.58e-01 | 83.1% | 85.8% |
| 4403046 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.58 | 52.0 | 4.41e-01 | 100.0% | 69.0% |
| 5048959 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.58 | 52.0 | 4.09e-01 | 100.0% | 89.2% |
| 4929265 | 2004.1.1.260 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MEDS | 0.57 | 50.0 | 4.29e-01 | 96.8% | 81.0% |
| 5077385 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.57 | 47.0 | 4.37e-01 | 100.0% | 71.0% |
| 4065889 | 2007.1.12.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase | 0.57 | 44.0 | 3.40e-01 | 82.3% | 38.2% |
| 3405128 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.56 | 45.0 | 4.11e-01 | 84.7% | 64.2% |
| 2979135 | 2484.1.1.7 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 | 0.56 | 42.0 | 4.33e-01 | 100.0% | 83.6% |
| 4943410 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.56 | 49.0 | 4.06e-01 | 100.0% | 71.5% |
| 3595022 | 7585.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins | 0.56 | 47.0 | 4.54e-01 | 91.9% | 95.0% |
| 5072160 | 7542.1.2.3 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › AcnX_2nd | 0.55 | 38.0 | 4.30e-01 | 100.0% | 96.7% |
| 3968146 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.55 | 47.0 | 4.10e-01 | 92.7% | 83.7% |
| 4996354 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.55 | 50.0 | 3.78e-01 | 100.0% | 87.3% |
| 4010065 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.54 | 48.0 | 4.26e-01 | 100.0% | 87.6% |
| 4929231 | 2002.3.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 | 0.54 | 48.0 | 3.75e-01 | 100.0% | 76.8% |
| 4385936 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.54 | 48.0 | 3.68e-01 | 99.2% | 93.2% |
| 3490628 | 2484.1.1.7 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 | 0.54 | 41.0 | 4.06e-01 | 84.7% | 76.7% |
| 5009357 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.54 | 47.0 | 3.39e-01 | 100.0% | 69.9% |
| 4600976 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 39.0 | 4.16e-01 | 100.0% | 87.3% |
| 3797618 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.53 | 41.0 | 3.73e-01 | 82.3% | 61.1% |
| 5056311 | 7542.1.2.3 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain II › AcnX_2nd | 0.52 | 35.0 | 3.91e-01 | 99.2% | 93.3% |
| 3793098 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.52 | 40.0 | 3.68e-01 | 83.9% | 67.9% |
| 3617753 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 42.0 | 2.98e-01 | 87.1% | 83.6% |
D2
high
residues 140-295
Domain cluster:
rep: NC_055027.1__YP_010082157.1__KMD16_gp63__00063__D9-149
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24083.2 best | Phage_ssDNA_bind | 157.8 | 3.10e-46 | 99.4% | 77.4% |