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NC_042018.1__YP_009612814.1__FDI45_gp070__00070
Bact-VirNC_042018.1__YP_009612814.1__FDI45_gp070__00070
Identity
- Accession:
- NC_042018 ↗
- Kingdom:
- phage
Quality
78.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Risingsunvirus›
Erwinia_phage_vB_EamM_RisingSun
TaxID: 2026080
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-55
Domain cluster:
representative
CATH (66)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5iqaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.73 | 59.0 | 4.84e-01 | 100.0% | 48.9% |
| 3c5iD01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.72 | 60.0 | 5.29e-01 | 100.0% | 76.3% |
| 3p8aA02 | 2.60.40.4320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 47.0 | 3.89e-01 | 100.0% | 37.8% |
| 3lzhA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.70 | 56.0 | 4.63e-01 | 100.0% | 48.4% |
| 6ctzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.69 | 54.0 | 4.48e-01 | 100.0% | 47.3% |
| 3fcdB00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.67 | 43.0 | 3.26e-01 | 100.0% | 26.9% |
| 3gvpA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 53.0 | 3.67e-01 | 87.5% | 38.4% |
| 3havA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 51.0 | 4.32e-01 | 100.0% | 48.3% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 57.0 | 4.18e-01 | 100.0% | 74.2% |
| 3pg7A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 53.0 | 4.21e-01 | 97.9% | 54.5% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.65 | 47.0 | 3.64e-01 | 100.0% | 36.3% |
| 3b59A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.65 | 45.0 | 3.41e-01 | 100.0% | 29.8% |
| 1ecsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.65 | 41.0 | 3.15e-01 | 100.0% | 25.8% |
| 2a6hC05 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 41.0 | 3.64e-01 | 95.8% | 41.3% |
| 6kykA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.64 | 44.0 | 3.78e-01 | 75.0% | 72.6% |
| 1xeeA01 | 3.10.20.390 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Chemotaxis-inhibiting protein CHIPS | 0.64 | 52.0 | 4.47e-01 | 95.8% | 86.6% |
| 2jh1A01 | 3.90.640.70 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.64 | 52.0 | 4.18e-01 | 100.0% | 85.2% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.64 | 46.0 | 4.54e-01 | 100.0% | 72.2% |
| 1ln1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.64 | 46.0 | 3.05e-01 | 87.5% | 18.7% |
| 1jqlA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 54.0 | 4.15e-01 | 100.0% | 85.7% |
| 1jssA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.64 | 45.0 | 3.03e-01 | 77.1% | 20.6% |
| 4emoC00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 53.0 | 4.11e-01 | 100.0% | 72.4% |
| 4omfB02 | 3.10.450.750 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 48.0 | 4.84e-01 | 100.0% | 91.5% |
| 1vpkA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.63 | 54.0 | 4.10e-01 | 100.0% | 85.7% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.62 | 46.0 | 3.30e-01 | 95.8% | 26.4% |
| 3u97A00 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.62 | 52.0 | 4.49e-01 | 95.8% | 79.2% |
| 3e0rB01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.62 | 41.0 | 3.16e-01 | 100.0% | 28.6% |
| 2ahoB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 42.0 | 3.63e-01 | 77.1% | 42.5% |
| 2je6I02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 40.0 | 3.39e-01 | 77.1% | 36.4% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 42.0 | 2.84e-01 | 75.0% | 19.2% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 45.0 | 4.35e-01 | 100.0% | 69.6% |
| 1mixA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 49.0 | 4.13e-01 | 97.9% | 58.1% |
| 1h4rA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 51.0 | 4.27e-01 | 100.0% | 57.1% |
| 1fx7B03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.61 | 51.0 | 4.43e-01 | 100.0% | 83.7% |
| 3hlzB01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.60 | 50.0 | 3.59e-01 | 100.0% | 32.1% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.60 | 43.0 | 4.12e-01 | 87.5% | 65.5% |
| 3m2oA01 | 3.30.720.120 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.60 | 44.0 | 4.30e-01 | 100.0% | 73.6% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 49.0 | 3.69e-01 | 100.0% | 78.1% |
| 3syjA02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.59 | 44.0 | 2.47e-01 | 87.5% | 6.2% |
| 7zoiA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 47.0 | 3.64e-01 | 95.8% | 98.4% |
| 2k49A00 | 2.30.29.80 | Mainly Beta › Roll › PH-domain like › | 0.58 | 45.0 | 3.62e-01 | 95.8% | 76.3% |
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 47.0 | 4.40e-01 | 100.0% | 73.8% |
| 6serA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 42.0 | 2.80e-01 | 81.2% | 19.3% |
| 4gs5A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.58 | 48.0 | 3.12e-01 | 97.9% | 23.8% |
| 4b1bA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 46.0 | 2.74e-01 | 95.8% | 43.2% |
| 4bs9A01 | 3.90.930.60 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.58 | 39.0 | 3.25e-01 | 97.9% | 36.8% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 41.0 | 4.15e-01 | 100.0% | 81.2% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.57 | 49.0 | 3.71e-01 | 100.0% | 50.8% |
| 2mouA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 40.0 | 2.71e-01 | 81.2% | 19.1% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 38.0 | 3.69e-01 | 100.0% | 61.7% |
| 1u8vA02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.55 | 40.0 | 3.05e-01 | 81.2% | 55.6% |
| 5yjwA00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.55 | 47.0 | 2.74e-01 | 100.0% | 22.0% |
| 1nr0A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 43.0 | 2.74e-01 | 100.0% | 20.2% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.55 | 45.0 | 4.01e-01 | 100.0% | 92.0% |
| 4xpmB00 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.54 | 41.0 | 3.93e-01 | 100.0% | 70.1% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.54 | 46.0 | 2.68e-01 | 100.0% | 22.6% |
| 1vqwA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 47.0 | 2.81e-01 | 100.0% | 38.9% |
| 3l8kA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 45.0 | 3.01e-01 | 100.0% | 58.5% |
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.54 | 42.0 | 3.62e-01 | 93.8% | 75.6% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 44.0 | 2.92e-01 | 100.0% | 58.9% |
| 4czxA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 41.0 | 2.65e-01 | 100.0% | 20.1% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 39.0 | 3.01e-01 | 85.4% | 48.8% |
| 2wm1A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 44.0 | 2.61e-01 | 95.8% | 13.3% |
| 1mtpA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 38.0 | 3.23e-01 | 81.2% | 51.6% |
| 1k8kD02 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 44.0 | 3.27e-01 | 100.0% | 69.5% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.50 | 38.0 | 3.57e-01 | 91.7% | 89.4% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3250994 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 49.0 | 4.41e-01 | 70.8% | 47.7% |
| 3460209 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.74 | 63.0 | 3.83e-01 | 100.0% | 20.6% |
| 4493478 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.73 | 55.0 | 3.97e-01 | 100.0% | 30.0% |
| 5027607 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.71 | 52.0 | 4.51e-01 | 100.0% | 50.7% |
| 431522 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.71 | 48.0 | 3.86e-01 | 100.0% | 36.6% |
| 3639196 | 3256.1.1.0 ↗ | a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain | 0.70 | 58.0 | 5.85e-01 | 100.0% | 93.9% |
| 3196827 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.68 | 55.0 | 4.79e-01 | 95.8% | 58.7% |
| 4034335 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.68 | 47.0 | 3.65e-01 | 100.0% | 32.7% |
| 3880677 | 2.1.1.251 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_HELZ2 | 0.67 | 44.0 | 3.72e-01 | 72.9% | 38.8% |
| 3235400 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.66 | 55.0 | 4.63e-01 | 100.0% | 60.7% |
| 4504559 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.65 | 50.0 | 4.85e-01 | 89.6% | 74.5% |
| 4927654 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 48.0 | 4.40e-01 | 100.0% | 60.0% |
| 3274271 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.65 | 55.0 | 3.49e-01 | 100.0% | 36.1% |
| 3603357 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 44.0 | 4.27e-01 | 100.0% | 61.8% |
| 1872769 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.65 | 45.0 | 4.29e-01 | 100.0% | 62.1% |
| 3931805 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 47.0 | 4.69e-01 | 100.0% | 80.0% |
| 3275983 | 206.1.2.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › SAICAR_synt | 0.64 | 44.0 | 2.78e-01 | 75.0% | 12.4% |
| 4031110 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 51.0 | 3.99e-01 | 100.0% | 39.2% |
| 3908855 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.64 | 45.0 | 4.38e-01 | 100.0% | 67.3% |
| 4943372 | 2.1.1.361 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EIF_2_alpha | 0.64 | 43.0 | 3.75e-01 | 83.3% | 43.8% |
| 3550644 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 47.0 | 4.52e-01 | 100.0% | 70.9% |
| 3793760 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.64 | 43.0 | 4.09e-01 | 100.0% | 58.3% |
| 4127839 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.64 | 47.0 | 4.11e-01 | 81.2% | 52.0% |
| 3827546 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.64 | 43.0 | 3.67e-01 | 72.9% | 41.2% |
| 5039760 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.63 | 47.0 | 4.25e-01 | 100.0% | 57.1% |
| 4874139 | 186.1.1.27 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › ResT-TelK_cat | 0.63 | 54.0 | 4.23e-01 | 100.0% | 46.4% |
| 4107506 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.63 | 46.0 | 4.24e-01 | 81.2% | 60.0% |
| 4990951 | 3535.1.1.0 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 | 0.63 | 53.0 | 3.94e-01 | 100.0% | 36.3% |
| 4159666 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.63 | 46.0 | 3.61e-01 | 81.2% | 35.8% |
| 3243115 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.62 | 43.0 | 2.83e-01 | 75.0% | 18.7% |
| 3852545 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 46.0 | 4.34e-01 | 100.0% | 65.0% |
| 3907221 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.62 | 44.0 | 2.93e-01 | 77.1% | 19.0% |
| 3992514 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 40.0 | 4.21e-01 | 95.8% | 77.5% |
| 4149829 | 220.1.1.114 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF5673 | 0.62 | 50.0 | 4.46e-01 | 95.8% | 74.7% |
| 3403111 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 40.0 | 3.59e-01 | 70.8% | 42.7% |
| 3373462 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.62 | 46.0 | 3.16e-01 | 100.0% | 23.7% |
| 4023063 | 216.1.1.8 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Knl1_RWD_C | 0.62 | 41.0 | 3.34e-01 | 100.0% | 34.7% |
| 3503291 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.62 | 45.0 | 3.55e-01 | 100.0% | 35.5% |
| 3511696 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.62 | 48.0 | 4.27e-01 | 100.0% | 60.0% |
| 3398496 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.61 | 45.0 | 4.36e-01 | 100.0% | 70.9% |
| 3743698 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.61 | 51.0 | 3.15e-01 | 100.0% | 32.3% |
| 2029624 | 1148.1.1.1 ↗ | a+b two layers › Cell wall binding protein cwp8 domain 2 › Cell wall binding protein cwp8 domain 2 › Cell wall binding protein cwp8 domain 2 › Cwp8_D2 | 0.61 | 50.0 | 4.15e-01 | 100.0% | 52.4% |
| 4251669 | 4.1.1.76 ↗ | beta barrels › SH3 › SH3 › SH3 › NdhO | 0.61 | 49.0 | 4.54e-01 | 100.0% | 80.0% |
| 3178608 | 234.1.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Microbial ribonucleases › Microbial ribonucleases | 0.61 | 53.0 | 4.44e-01 | 100.0% | 57.6% |
| 3782688 | 59.1.4.1 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N | 0.61 | 51.0 | 3.56e-01 | 100.0% | 28.6% |
| 3560455 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 48.0 | 2.85e-01 | 100.0% | 12.0% |
| 2526324 | 7086.1.1.0 ↗ | 0.61 | 44.0 | 3.64e-01 | 81.2% | 86.3% | |
| 3526919 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.61 | 45.0 | 3.68e-01 | 87.5% | 42.1% |
| 5078685 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.60 | 49.0 | 4.32e-01 | 100.0% | 75.0% |
| 4508199 | 220.1.1.242 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › EbsA | 0.60 | 50.0 | 4.48e-01 | 97.9% | 72.9% |
| 4943405 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.60 | 50.0 | 3.85e-01 | 100.0% | 86.4% |
| 3843072 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.59 | 50.0 | 3.17e-01 | 100.0% | 19.3% |
| 3934192 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 47.0 | 4.50e-01 | 100.0% | 75.0% |
| 4669519 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.59 | 48.0 | 3.49e-01 | 91.7% | 54.1% |
| 3728082 | 4357.1.1.7 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › DUF7131 | 0.58 | 51.0 | 4.30e-01 | 97.9% | 80.0% |
| 3230776 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.58 | 48.0 | 2.92e-01 | 100.0% | 15.7% |
| 2048176 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.58 | 49.0 | 3.49e-01 | 100.0% | 62.0% |
| None | — | 0.58 | 47.0 | 2.90e-01 | 100.0% | 31.7% | |
| 3928136 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 45.0 | 4.28e-01 | 100.0% | 75.0% |
| 4372287 | 5.1.4.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N | 0.57 | 48.0 | 2.88e-01 | 100.0% | 13.2% |
| 3784757 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.57 | 49.0 | 2.80e-01 | 100.0% | 19.6% |
| 4033832 | 3425.2.1.2 ↗ | a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain › YycI | 0.56 | 43.0 | 3.02e-01 | 100.0% | 23.3% |
| 3218816 | 5.1.4.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 | 0.56 | 45.0 | 2.73e-01 | 100.0% | 28.4% |
| 4024730 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.56 | 45.0 | 3.82e-01 | 93.8% | 62.4% |
| 3391117 | 5.1.11.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 | 0.56 | 45.0 | 2.80e-01 | 100.0% | 17.4% |
| None | — | 0.56 | 48.0 | 2.96e-01 | 100.0% | 20.0% | |
| 3268245 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.55 | 45.0 | 3.68e-01 | 95.8% | 82.0% |
| 3236929 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.55 | 44.0 | 3.01e-01 | 95.8% | 35.6% |
| 3363253 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.55 | 49.0 | 2.87e-01 | 100.0% | 14.3% |
| 4964236 | 2008.4.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › TBP-interacting protein N-terminal domain-like › TBP-interacting protein N-terminal domain-like | 0.54 | 47.0 | 3.76e-01 | 100.0% | 65.0% |
| 3597608 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.54 | 46.0 | 3.25e-01 | 100.0% | 73.1% |
| 3990517 | 5.1.4.502 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IFT80_2nd | 0.54 | 43.0 | 2.53e-01 | 100.0% | 9.9% |
| 3612733 | 109.21.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain | 0.53 | 43.0 | 2.40e-01 | 95.8% | 46.0% |
| 3931379 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 42.0 | 4.15e-01 | 100.0% | 83.6% |
| 4938468 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.53 | 45.0 | 2.85e-01 | 100.0% | 78.5% |
| 1144799 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.53 | 44.0 | 3.17e-01 | 100.0% | 62.5% |
| 3234900 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.52 | 42.0 | 2.80e-01 | 100.0% | 69.8% |
| 4947234 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.51 | 43.0 | 2.65e-01 | 100.0% | 64.1% |
| 3899046 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.51 | 42.0 | 2.92e-01 | 100.0% | 37.8% |
| 4979007 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.50 | 44.0 | 3.15e-01 | 100.0% | 46.4% |
D2
high
residues 58-161
Domain cluster:
rep: NC_007623.1__YP_418098.1__PPEV_gp065__00065__D58-159
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p25A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.65 | 34.0 | 3.25e-01 | 100.0% | 43.7% |
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 30.0 | 3.51e-01 | 96.2% | 60.8% |
| 1rl1A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 31.0 | 3.32e-01 | 100.0% | 59.8% |
| 2rh0A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 27.0 | 3.22e-01 | 96.2% | 78.1% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 33.0 | 3.26e-01 | 100.0% | 62.0% |
| 1tyeA00 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.51 | 44.0 | 2.95e-01 | 99.0% | 92.5% |
| 1vqwA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 38.0 | 2.76e-01 | 80.8% | 75.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3659833 | 2007.5.1.17 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase | 0.54 | 33.0 | 2.50e-01 | 100.0% | 23.9% |
| 3488710 | 319.1.1.5 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS | 0.53 | 33.0 | 3.49e-01 | 96.2% | 70.0% |
| 1176501 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.53 | 30.0 | 3.27e-01 | 93.3% | 66.3% |
| 3279508 | 283.1.1.4 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › ThrE | 0.52 | 34.0 | 3.16e-01 | 100.0% | 51.1% |