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NC_042018.1__YP_009612901.1__FDI45_gp157__00157

Bact-Vir

Identity

Accession:: NC_042018 ↗
Kingdom:: phage

Quality

64.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Risingsunvirus› Erwinia_phage_vB_EamM_RisingSun

TaxID: 2026080

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-108

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3uumA00	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.72	60.0	5.30e-01	88.6%	87.7%
3zciA00	1.20.58.1660	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.69	58.0	4.46e-01	90.9%	99.5%
1t98A02	1.20.58.590	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain	0.67	54.0	4.40e-01	92.0%	46.6%
1s7oB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.64	41.0	3.85e-01	75.0%	54.3%
7pbkA01	3.30.420.10	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H	0.56	45.0	3.32e-01	86.4%	81.1%
4acoA01	1.10.150.130	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain	0.53	43.0	3.94e-01	85.2%	73.6%
4krdB00	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.51	36.0	2.87e-01	73.9%	63.7%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3240782	190.1.1.1 ↗	alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box	0.82	42.0	3.46e-01	71.6%	30.0%
5012473	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.67	58.0	5.31e-01	92.0%	72.7%
3273910	622.4.1.0 ↗	alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related	0.65	51.0	4.59e-01	85.2%	62.6%
4541653	4970.1.1.0 ↗	alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I	0.64	48.0	4.71e-01	81.8%	72.6%
3444845	4106.1.1.1 ↗	few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC	0.62	52.0	4.08e-01	92.0%	91.6%
3734712	604.3.1.11 ↗	alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155	0.61	45.0	3.10e-01	77.3%	52.2%
3175091	1002.1.1.1 ↗	alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB	0.59	45.0	3.61e-01	81.8%	72.0%
5013534	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.56	42.0	3.45e-01	78.4%	71.0%
4540106	3396.1.1.3 ↗	extended segments › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG1 domain family member 1A › DUF4481	0.56	44.0	4.64e-01	86.4%	91.3%
3711919	3187.1.1.0 ↗	alpha bundles › Microtubule-Binding Domain of Flagellar Dynein › Microtubule-Binding Domain of Flagellar Dynein › Microtubule-Binding Domain of Flagellar Dynein	0.53	45.0	3.71e-01	97.7%	90.3%
4470607	101.1.1.26 ↗	alpha arrays › HTH › HTH › Three-helical HTH › UPF0122	0.53	45.0	4.19e-01	97.7%	74.8%
None	—		0.50	41.0	3.93e-01	93.2%	78.1%