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NC_042018.1__YP_009612969.1__FDI45_gp225__00225

Bact-Vir

NC_042018.1__YP_009612969.1__FDI45_gp225__00225

Identity

Accession:
NC_042018 ↗
Kingdom:
phage

Quality

82.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-128
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4f98A00 2.30.140.50 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Protein of unknown function DUF2790 0.58 19.0 2.54e-01 85.6% 46.8%
2avxA00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.55 32.0 2.79e-01 100.0% 36.8%
1vzyA01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.53 38.0 3.01e-01 74.8% 98.7%
8bs9A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 41.0 3.08e-01 88.3% 73.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1893038 11.1.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.57 27.0 3.54e-01 85.6% 83.3%
4233683 171.1.1.1 alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 0.51 38.0 3.06e-01 77.5% 87.3%
4980535 101.1.2.914 alpha arrays › HTH › HTH › winged helix domain › DUF6015 0.50 35.0 3.73e-01 73.0% 84.2%
3218266 5001.1.1.41 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw 0.50 37.0 2.69e-01 78.4% 76.3%