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NC_042020.1__YP_009613251.1__FDI47_gp27__00027
Bact-VirNC_042020.1__YP_009613251.1__FDI47_gp27__00027
Identity
- Accession:
- NC_042020 ↗
- Kingdom:
- phage
Quality
65.6
mean pLDDT
Taxonomy
TaxID: 2027883
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 170-290
Domain cluster:
rep: NC_073481.1__YP_010756090.1__QEJ66_gp08__00008__D21-190
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18896.6 best | SLT_3 | 27.5 | 4.50e-06 | 66.9% | 98.8% |
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 72.0 | 6.14e-01 | 95.0% | 92.9% |
| 3bkhA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 71.0 | 6.09e-01 | 94.2% | 97.8% |
| 3ct5A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.80 | 74.0 | 6.70e-01 | 100.0% | 93.1% |
| 6cfcA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.78 | 68.0 | 6.08e-01 | 91.7% | 93.2% |
| 4c5fA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.78 | 69.0 | 6.11e-01 | 94.2% | 100.0% |
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.77 | 70.0 | 6.19e-01 | 98.3% | 91.3% |
| 153lA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.77 | 71.0 | 6.09e-01 | 100.0% | 77.3% |
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.76 | 68.0 | 6.17e-01 | 95.9% | 93.0% |
| 3w6bB00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.75 | 66.0 | 6.07e-01 | 95.0% | 93.5% |
| 4fdyA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.72 | 62.0 | 5.60e-01 | 91.7% | 96.9% |
| 6ukcA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.71 | 64.0 | 6.24e-01 | 98.3% | 97.7% |
| 1iizA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.70 | 64.0 | 6.43e-01 | 99.2% | 99.2% |
| 3fi7A01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.67 | 62.0 | 6.06e-01 | 100.0% | 96.2% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.64 | 35.0 | 3.83e-01 | 70.2% | 62.5% |
| 1k87A02 | 1.10.2060.10 | Mainly Alpha › Orthogonal Bundle › PutA proline dehydrogenase (PRODH), domain 2 › PutA proline dehydrogenase (PRODH), domain 2 | 0.61 | 37.0 | 3.89e-01 | 98.3% | 66.1% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 38.0 | 4.60e-01 | 82.6% | 100.0% |
| 3k3fA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.56 | 42.0 | 3.10e-01 | 81.8% | 29.2% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 45.0 | 4.65e-01 | 85.1% | 93.8% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 40.0 | 4.48e-01 | 82.6% | 95.9% |
| 4gmqA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.53 | 37.0 | 4.17e-01 | 88.4% | 94.6% |
| 1aorA02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.53 | 46.0 | 4.03e-01 | 95.9% | 87.1% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 45.0 | 4.35e-01 | 88.4% | 85.6% |
| 2lyiA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.53 | 41.0 | 3.85e-01 | 82.6% | 97.3% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 41.0 | 4.38e-01 | 83.5% | 96.1% |
| 2b9rA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 44.0 | 4.21e-01 | 93.4% | 79.3% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 41.0 | 4.20e-01 | 88.4% | 87.7% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 43.0 | 4.11e-01 | 88.4% | 82.1% |
| 1vinA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 43.0 | 4.18e-01 | 94.2% | 79.9% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 43.0 | 4.04e-01 | 88.4% | 76.9% |
| 6pl6B01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 41.0 | 3.01e-01 | 87.6% | 86.7% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 39.0 | 4.09e-01 | 88.4% | 87.6% |
| 1f5qB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 40.0 | 4.17e-01 | 87.6% | 90.8% |
| 1xg7A02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.51 | 45.0 | 4.33e-01 | 100.0% | 97.2% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3284481 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.92 | 89.0 | 8.36e-01 | 100.0% | 97.9% |
| 4013288 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.90 | 87.0 | 8.10e-01 | 100.0% | 94.4% |
| 3968994 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.81 | 73.0 | 6.64e-01 | 95.9% | 99.4% |
| 4530587 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.81 | 70.0 | 5.96e-01 | 91.7% | 91.4% |
| 3289790 | 235.1.1.23 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme2 | 0.80 | 73.0 | 6.71e-01 | 98.3% | 98.7% |
| 4515466 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.80 | 74.0 | 6.40e-01 | 99.2% | 96.7% |
| 3979308 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.80 | 73.0 | 6.37e-01 | 98.3% | 97.1% |
| 1253692 | 235.1.1.23 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme2 | 0.79 | 74.0 | 6.63e-01 | 100.0% | 91.4% |
| 4258903 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.79 | 66.0 | 5.89e-01 | 88.4% | 95.2% |
| 3971115 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.77 | 70.0 | 6.22e-01 | 97.5% | 94.7% |
| 5028353 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.76 | 71.0 | 6.13e-01 | 100.0% | 94.4% |
| 3945171 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.76 | 68.0 | 6.42e-01 | 96.7% | 91.0% |
| 3839661 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.76 | 70.0 | 6.17e-01 | 98.3% | 92.4% |
| 3978932 | 235.1.1.35 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › DUF1615 | 0.76 | 68.0 | 5.77e-01 | 97.5% | 92.9% |
| 4009649 | 632.3.1.13 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › DUF1615 | 0.76 | 68.0 | 6.20e-01 | 97.5% | 88.1% |
| 3884688 | 235.1.1.31 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › PF31087 | 0.76 | 68.0 | 6.02e-01 | 98.3% | 80.6% |
| 3964630 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.75 | 68.0 | 6.09e-01 | 97.5% | 76.8% |
| 3289359 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.75 | 69.0 | 6.00e-01 | 100.0% | 91.7% |
| 4164050 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.74 | 68.0 | 5.70e-01 | 100.0% | 84.9% |
| 3978377 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.74 | 68.0 | 5.76e-01 | 99.2% | 89.2% |
| 1005039 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.74 | 66.0 | 5.97e-01 | 95.0% | 90.5% |
| 3965879 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.74 | 68.0 | 6.10e-01 | 100.0% | 90.9% |
| 4983277 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.55 | 45.0 | 3.33e-01 | 89.3% | 74.4% |
| 3397746 | 2498.1.1.3 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M2 | 0.54 | 44.0 | 2.83e-01 | 87.6% | 36.4% |
| 3492714 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 48.0 | 4.19e-01 | 100.0% | 66.1% |
| 3581101 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.53 | 47.0 | 4.18e-01 | 98.3% | 68.8% |
| 3627307 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.52 | 43.0 | 3.72e-01 | 88.4% | 58.3% |
| 3163671 | 3355.1.1.11 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › GntP_permease | 0.51 | 40.0 | 2.86e-01 | 86.0% | 54.0% |
| 3637204 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 47.0 | 3.42e-01 | 100.0% | 67.8% |
| 3647820 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 47.0 | 4.08e-01 | 100.0% | 85.4% |
D2
high
residues 303-435
Domain cluster:
rep: NC_041949.1__YP_009603225.1__FDH66_gp61__00037__D5-161
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05257.23 best | CHAP | 39.9 | 6.50e-10 | 70.7% | 96.3% |