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NC_042025.1__YP_009613580.1__FDI52_gp51__00051
Bact-VirNC_042025.1__YP_009613580.1__FDI52_gp51__00051
Identity
- Accession:
- NC_042025 ↗
- Kingdom:
- phage
Quality
85.3
mean pLDDT
Taxonomy
TaxID: 2115848
Cluster
View cluster (23 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-72
Domain cluster:
rep: KU574722.1__AMM43979.1__CBB_416__00416__D10-68
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lgdA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.61 | 37.0 | 2.24e-01 | 100.0% | 8.5% |
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 40.0 | 4.26e-01 | 76.8% | 98.3% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 40.0 | 3.24e-01 | 76.8% | 48.5% |
| 4c92F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 40.0 | 3.88e-01 | 76.8% | 80.5% |
| 6igbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 47.0 | 3.01e-01 | 100.0% | 98.6% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 3.99e-01 | 76.8% | 85.3% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 4.04e-01 | 76.8% | 86.2% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 3.86e-01 | 76.8% | 79.5% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 3.70e-01 | 76.8% | 84.0% |
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 45.0 | 3.01e-01 | 92.8% | 29.0% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.53 | 38.0 | 3.26e-01 | 75.4% | 51.4% |
| 3ge2A00 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 34.0 | 3.16e-01 | 81.2% | 49.4% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 3.89e-01 | 76.8% | 79.4% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 3.61e-01 | 76.8% | 70.7% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 38.0 | 3.78e-01 | 76.8% | 81.7% |
| 8dqwG01 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.52 | 42.0 | 3.19e-01 | 91.3% | 43.4% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 3.28e-01 | 76.8% | 57.1% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 3.66e-01 | 76.8% | 71.6% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3910857 | 4138.1.1.1 ↗ | few secondary structure elements › Granulin repeat › Granulin repeat › Granulin repeat › Granulin | 0.66 | 49.0 | 4.80e-01 | 79.7% | 100.0% |
| 3170398 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.59 | 43.0 | 3.73e-01 | 76.8% | 65.7% |
| 3341533 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.58 | 42.0 | 3.80e-01 | 76.8% | 74.7% |
| 4013632 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 42.0 | 4.01e-01 | 76.8% | 75.6% |
| 3699819 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.56 | 41.0 | 3.66e-01 | 76.8% | 73.7% |
| 5003044 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.56 | 41.0 | 2.88e-01 | 76.8% | 40.5% |
| 3744268 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.56 | 46.0 | 3.72e-01 | 91.3% | 54.8% |
| 3619927 | 9.2.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7042 | 0.56 | 41.0 | 3.57e-01 | 81.2% | 94.8% |
| 3787684 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.55 | 39.0 | 3.45e-01 | 76.8% | 71.4% |
| 4466445 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.55 | 45.0 | 3.48e-01 | 91.3% | 56.8% |
| 4010995 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 39.0 | 3.87e-01 | 76.8% | 88.0% |
| 4937158 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 34.0 | 3.62e-01 | 78.3% | 73.3% |
| 5075579 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 39.0 | 3.75e-01 | 76.8% | 72.5% |
| 3978624 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.54 | 45.0 | 3.66e-01 | 91.3% | 90.8% |
| 3730294 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.53 | 39.0 | 3.71e-01 | 76.8% | 81.2% |
| 3244451 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.53 | 38.0 | 3.54e-01 | 76.8% | 63.3% |
| 3586008 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 39.0 | 3.88e-01 | 76.8% | 80.0% |
| 3798355 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.53 | 43.0 | 3.48e-01 | 91.3% | 50.0% |
| 3197566 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.52 | 39.0 | 3.43e-01 | 78.3% | 79.0% |
| 4029154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 38.0 | 3.21e-01 | 78.3% | 52.9% |
| 3254881 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 3.65e-01 | 75.4% | 84.0% |
| 3214326 | 4.1.1.81 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM14 | 0.52 | 37.0 | 3.77e-01 | 76.8% | 78.6% |
| 3614413 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.52 | 38.0 | 3.14e-01 | 78.3% | 56.8% |
| 3249844 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.51 | 37.0 | 3.47e-01 | 78.3% | 76.7% |