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NC_042032.1__YP_009614150.1__FDI61_gp032__00032

Bact-Vir

Identity

Accession:: NC_042032 ↗
Kingdom:: phage

Quality

88.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Marvinvirus› Mycobacterium_phage_Marvin

TaxID: 1034139

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-83

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2xssA00	3.30.450.40	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain	0.62	34.0	2.67e-01	74.1%	27.6%
1cdcA00	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.61	31.0	2.92e-01	72.8%	37.5%
3ttqA03	3.20.20.80	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases	0.60	41.0	2.97e-01	70.4%	84.3%
4r9iA01	3.30.497.10	Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2	0.58	48.0	3.33e-01	90.1%	78.8%
1a3wA01	3.40.1380.20	Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain	0.56	34.0	2.74e-01	79.0%	31.6%
1jzdC00	2.60.40.1250	Mainly Beta › Sandwich › Immunoglobulin-like › Thiol:disulfide interchange protein DsbD, N-terminal domain	0.55	38.0	3.34e-01	71.6%	85.6%
3iibA01	3.40.630.10	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases	0.52	45.0	3.12e-01	97.5%	81.8%
2byfA01	3.10.20.90	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1	0.50	39.0	3.63e-01	86.4%	80.4%
5b08A00	3.30.70.100	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.50	35.0	3.36e-01	84.0%	60.0%
6canA01	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.50	42.0	2.96e-01	98.8%	96.7%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3364715	2484.1.1.67 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3	0.71	34.0	3.34e-01	74.1%	43.5%
4857423	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.64	38.0	3.66e-01	72.8%	51.1%
5062579	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.62	31.0	3.26e-01	71.6%	49.3%
4029586	10.32.1.203 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin	0.60	32.0	2.68e-01	72.8%	27.3%
3915206	10.32.1.203 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin	0.60	33.0	2.60e-01	71.6%	24.0%
4607431	11.1.1.1150 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › InlK_D3	0.56	31.0	2.81e-01	70.4%	38.9%
3993970	2.9.1.1 ↗	beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB	0.55	43.0	2.84e-01	87.7%	36.4%
4996027	304.139.1.2 ↗	a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs	0.53	40.0	2.90e-01	84.0%	57.7%
3901188	2004.1.1.19 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras	0.52	36.0	3.34e-01	79.0%	57.0%
3912477	5001.1.1.5 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3	0.50	45.0	2.98e-01	98.8%	62.5%