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NC_042033.1__YP_009614237.1__FDI62_gp12__00012
Bact-VirNC_042033.1__YP_009614237.1__FDI62_gp12__00012
Identity
- Accession:
- NC_042033 ↗
- Kingdom:
- phage
Quality
60.1
mean pLDDT
Taxonomy
TaxID: 1034146
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 599-727
Domain cluster:
rep: IMGVR_UViG_3300009121_000002-3300009121-Ga0118671_100022844__D148-279
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4l63A00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.64 | 53.0 | 4.26e-01 | 89.1% | 50.6% |
| 7y7oA01 | 3.40.390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" | 0.63 | 51.0 | 4.97e-01 | 89.1% | 78.3% |
| 4c7gA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.54 | 40.0 | 3.99e-01 | 89.9% | 75.0% |
| 3suuA02 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.53 | 43.0 | 4.17e-01 | 89.9% | 77.9% |
| 2p90A01 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.51 | 42.0 | 3.54e-01 | 89.1% | 88.4% |
| 6ryzC01 | 3.40.50.10790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal | 0.50 | 41.0 | 3.81e-01 | 87.6% | 87.7% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3242920 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.80 | 50.0 | 4.75e-01 | 80.6% | 54.0% |
| 4024134 | 2498.1.1.65 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › MATCAP | 0.77 | 46.0 | 3.22e-01 | 79.1% | 21.1% |
| 4310284 | 2498.1.1.143 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF3318 | 0.77 | 45.0 | 3.81e-01 | 97.7% | 37.0% |
| 4027214 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.76 | 47.0 | 5.69e-01 | 97.7% | 94.1% |
| 5075577 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.75 | 45.0 | 4.34e-01 | 80.6% | 53.1% |
| 3989086 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.75 | 38.0 | 3.28e-01 | 74.4% | 33.2% |
| 5057982 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.74 | 47.0 | 4.03e-01 | 76.7% | 42.1% |
| 3936153 | 2498.1.1.39 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like | 0.74 | 51.0 | 4.80e-01 | 100.0% | 60.0% |
| 4223692 | 2498.1.1.58 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF2201_N | 0.73 | 45.0 | 4.11e-01 | 82.2% | 47.1% |
| 5067875 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.71 | 51.0 | 4.19e-01 | 93.8% | 42.2% |
| 4937224 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.71 | 46.0 | 4.03e-01 | 82.9% | 45.9% |
| 3633665 | 2498.1.1.72 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › BSP | 0.66 | 53.0 | 4.32e-01 | 89.1% | 46.8% |
| 3714457 | 2498.1.1.36 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › WLM | 0.65 | 48.0 | 4.39e-01 | 90.7% | 58.2% |
| 3696059 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.65 | 51.0 | 4.37e-01 | 89.1% | 53.0% |
| 3272315 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.63 | 57.0 | 5.11e-01 | 98.4% | 74.4% |
| 4013373 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.63 | 53.0 | 4.40e-01 | 89.9% | 52.5% |
| 4011118 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.62 | 50.0 | 3.95e-01 | 94.6% | 41.1% |
| 5046934 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.62 | 42.0 | 4.23e-01 | 98.4% | 67.7% |
| 3193512 | 2498.1.1.72 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › BSP | 0.62 | 53.0 | 4.32e-01 | 89.9% | 51.7% |
| 3252321 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.60 | 54.0 | 5.06e-01 | 98.4% | 85.2% |
| 3252320 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.58 | 52.0 | 5.15e-01 | 97.7% | 95.6% |
| 4014518 | 261.1.1.0 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.58 | 51.0 | 4.90e-01 | 96.9% | 92.0% |
| 3980571 | 4334.1.1.1 ↗ | beta complex topology › Inserted beta sandwich domain in Dac-like proteins › Inserted beta sandwich domain in Dac-like proteins › Inserted beta sandwich domain in Dac-like proteins › Peptidase_S13 | 0.57 | 32.0 | 3.87e-01 | 83.7% | 86.3% |
| 3708162 | 2006.1.6.48 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF7163 | 0.57 | 46.0 | 4.00e-01 | 87.6% | 96.0% |
| 4026205 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.56 | 47.0 | 4.07e-01 | 89.9% | 78.5% |
| 1837418 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.56 | 41.0 | 4.09e-01 | 77.5% | 73.7% |
| 3609379 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.55 | 43.0 | 4.43e-01 | 89.1% | 89.2% |
| 3704399 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.53 | 45.0 | 4.11e-01 | 89.1% | 90.9% |
| 3404637 | 2498.2.1.3 ↗ | mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › NAGLU_N | 0.52 | 34.0 | 3.90e-01 | 97.7% | 91.6% |
| 4112877 | 2498.1.1.122 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PF29448 | 0.52 | 42.0 | 3.69e-01 | 89.1% | 78.5% |
| 3781512 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.51 | 42.0 | 3.52e-01 | 89.1% | 85.9% |
| 4581673 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.50 | 43.0 | 4.25e-01 | 100.0% | 86.4% |
D2
high
residues 733-853
D3
medium
residues 11-151
D4
medium
residues 461-555