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NC_042044.1__YP_009615611.1__FDI73_gp125__00125
Bact-VirNC_042044.1__YP_009615611.1__FDI73_gp125__00125
Identity
- Accession:
- NC_042044 ↗
- Kingdom:
- phage
Quality
81.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Gelderlandvirus›
Salmonella_phage_Melville
TaxID: 2041413
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-111
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ohxA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 44.0 | 3.51e-01 | 80.0% | 75.4% |
| 2dulA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 38.0 | 2.80e-01 | 72.7% | 85.4% |
| 1wv8A00 | 3.30.2390.10 | Alpha Beta › 2-Layer Sandwich › TTHA1013/TTHA0281-like › TTHA1013-like | 0.52 | 31.0 | 3.67e-01 | 70.0% | 90.1% |
| 4wqkA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.52 | 35.0 | 3.08e-01 | 70.0% | 76.0% |
| 3ve9A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 44.0 | 3.63e-01 | 96.4% | 99.5% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.50 | 35.0 | 3.51e-01 | 72.7% | 95.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945393 | 7089.1.1.2 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF5405 | 0.57 | 40.0 | 4.61e-01 | 73.6% | 100.0% |
| 5002624 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.56 | 30.0 | 3.66e-01 | 95.5% | 82.9% |