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NC_042049.1__YP_009616312.1__FDI78_gp22__00022

Bact-Vir

NC_042049.1__YP_009616312.1__FDI78_gp22__00022

Identity

Accession:
NC_042049 ↗
Kingdom:
phage

Quality

92.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 76-280
PDB
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jnrB02 6.20.260.10 Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain 0.76 15.0 2.57e-01 90.7% 44.6%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.70 17.0 3.54e-01 89.8% 80.4%
5karA01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.68 59.0 4.65e-01 91.7% 83.2%
1oe8A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.67 29.0 4.37e-01 97.6% 98.8%
1m0uA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 27.0 3.92e-01 95.6% 86.8%
3tghA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.61 53.0 4.59e-01 92.7% 87.9%
2h8lA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.61 31.0 4.07e-01 95.1% 87.5%
1a8lA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 29.0 3.72e-01 93.7% 77.8%
2cvbA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 37.0 3.91e-01 98.5% 71.1%
1g7eA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 31.0 3.85e-01 98.5% 87.7%
3elbA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 35.0 3.85e-01 89.8% 77.0%
4kq9A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 27.0 3.73e-01 78.5% 95.9%
5x4kA01 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.54 36.0 3.74e-01 95.6% 70.4%
5iryA05 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.54 18.0 2.81e-01 90.2% 70.6%
4xijA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.54 33.0 4.05e-01 98.0% 96.9%
4rsmD01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 38.0 4.18e-01 97.6% 90.8%
6hcdD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 35.0 4.19e-01 90.2% 99.3%
3p9pA03 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.53 35.0 3.99e-01 92.7% 87.7%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 33.0 3.98e-01 94.1% 95.3%
2lttA00 2.30.31.70 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.52 18.0 2.78e-01 98.5% 75.7%
3ksmA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 33.0 3.96e-01 86.3% 100.0%
6joaA03 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.52 34.0 3.90e-01 93.2% 87.8%
4kvfA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 35.0 3.90e-01 98.5% 88.7%
1dk7A00 3.50.7.10 Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL 0.51 31.0 3.59e-01 84.4% 82.9%
3a2kA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 30.0 3.62e-01 86.3% 88.1%
2f9fA00 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.50 34.0 3.68e-01 97.6% 82.5%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5080277 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.73 62.0 5.81e-01 88.3% 100.0%
3396974 2485.2.1.1 a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert 0.64 31.0 4.25e-01 94.6% 89.5%
4423884 2485.1.1.4 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.64 36.0 3.82e-01 99.0% 60.0%
4423879 2485.1.1.37 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_2 0.64 36.0 4.15e-01 99.5% 73.5%
3385710 2485.1.1.12 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SCO1-SenC 0.57 38.0 4.20e-01 98.0% 84.4%
3715958 2485.1.1.45 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_8 0.55 37.0 4.04e-01 98.5% 80.0%
4928867 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.54 35.0 3.83e-01 91.2% 76.5%
3968130 2007.1.1.20 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Catalase_C 0.52 35.0 3.94e-01 93.2% 87.7%
2599826 2007.1.1.20 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Catalase_C 0.52 34.0 3.90e-01 93.2% 87.8%
1390955 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.51 34.0 3.88e-01 89.8% 88.5%
D2 high residues 284-441
PDB
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6w6aA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 39.0 3.36e-01 93.0% 35.7%
3rl3A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.67 46.0 3.80e-01 100.0% 40.2%
3bleA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.65 43.0 3.43e-01 100.0% 34.2%
2o7sA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 37.0 3.23e-01 100.0% 39.1%
3mb5A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 34.0 3.25e-01 95.6% 45.1%
2opjA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 33.0 3.04e-01 93.0% 39.4%
4pcaB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 37.0 3.29e-01 94.9% 44.5%
1dl5A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 35.0 3.26e-01 95.6% 46.3%
7fevA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 54.0 3.97e-01 100.0% 60.6%
1fdyB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 41.0 3.35e-01 100.0% 38.8%
1jqxA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 42.0 3.54e-01 100.0% 44.9%
1gz1A00 3.20.20.40 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase 0.57 52.0 4.01e-01 100.0% 81.8%
4wfsA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 42.0 3.76e-01 100.0% 54.1%
3rcnA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 52.0 4.09e-01 100.0% 62.9%
7cboA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.57 52.0 3.93e-01 100.0% 58.6%
1dysA00 3.20.20.40 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase 0.57 51.0 4.00e-01 100.0% 85.5%
1pyfA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.57 47.0 3.75e-01 100.0% 45.0%
1nowA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 50.0 3.89e-01 100.0% 53.3%
4l80D00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.55 42.0 3.30e-01 100.0% 36.6%
6ki3A01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.55 44.0 3.61e-01 99.4% 45.4%
6jebA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 49.0 3.83e-01 100.0% 61.2%
2hk0A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.54 47.0 3.82e-01 100.0% 51.0%
2w5fA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 49.0 3.78e-01 100.0% 54.0%
1yozA00 1.10.3200.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like 0.53 37.0 4.28e-01 94.3% 100.0%
2xsaA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 49.0 4.05e-01 100.0% 64.3%
6uh2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 48.0 4.21e-01 100.0% 90.3%
6kikA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.52 41.0 3.39e-01 100.0% 47.3%
6zb8A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 47.0 3.66e-01 100.0% 61.9%
4uxdA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 41.0 3.38e-01 100.0% 47.4%
2hzgA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.51 42.0 3.64e-01 100.0% 56.0%
2qs7A00 3.40.1260.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like 0.51 38.0 4.07e-01 100.0% 89.1%
3kzsA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 46.0 4.07e-01 100.0% 76.2%
2jgqA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 44.0 3.90e-01 100.0% 64.1%
3itlD00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.51 46.0 3.38e-01 100.0% 37.5%
6pznB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 46.0 4.00e-01 100.0% 90.9%
2bvdA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.50 46.0 3.80e-01 100.0% 56.5%
6gwuD00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.50 41.0 3.83e-01 88.6% 81.2%
3sjnA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.50 41.0 3.46e-01 100.0% 53.5%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5022956 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.61 39.0 3.51e-01 94.9% 46.5%
3500810 2008.1.1.68 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PND 0.58 31.0 3.52e-01 100.0% 65.8%
376203 2002.2.1.1 a/b barrels › TIM beta/alpha-barrel › Cellulases › Cellulases › Glyco_hydro_6 0.58 53.0 4.02e-01 100.0% 81.2%
3240850 2004.1.1.47 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › G-alpha 0.57 52.0 4.55e-01 100.0% 77.9%
4956047 2002.1.1.74 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2 0.57 52.0 4.23e-01 100.0% 67.3%
3236997 2002.1.1.33 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 0.56 51.0 3.53e-01 100.0% 39.8%
3943700 2002.1.1.182 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GHL13 0.56 51.0 3.86e-01 100.0% 58.4%
4939842 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.55 43.0 3.81e-01 95.6% 56.9%
3634131 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.54 49.0 4.00e-01 100.0% 89.8%
3694326 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.54 48.0 4.00e-01 100.0% 91.7%
4148742 2002.1.1.234 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2+Meth_synt_1 0.53 48.0 3.70e-01 100.0% 65.6%
3216159 2007.5.1.0 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.53 48.0 4.01e-01 100.0% 85.4%
4979409 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.53 41.0 3.21e-01 94.9% 37.1%
141864 2003.1.1.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.52 47.0 3.92e-01 100.0% 87.9%
4276454 2002.1.1.266 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF27526 0.52 47.0 3.47e-01 100.0% 46.0%
2719448 2002.1.1.8 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Cellulase 0.52 47.0 3.82e-01 100.0% 73.7%
3707561 2007.5.1.18 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL,Cu-binding_MopE 0.52 47.0 3.47e-01 100.0% 70.6%
5050443 2002.1.1.96 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › S-methyl_trans 0.51 47.0 3.81e-01 100.0% 59.3%
3776724 2007.5.1.0 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.50 46.0 3.84e-01 100.0% 82.5%
D3 medium residues 12-75
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02954.26 best HTH_8 32.1 1.10e-07 60.9% 69.0%
CATH (93)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 60.0 6.14e-01 70.3% 73.8%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.85 68.0 5.25e-01 84.4% 55.7%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 58.0 5.79e-01 70.3% 69.2%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 64.0 5.84e-01 79.7% 84.1%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 57.0 5.75e-01 70.3% 70.3%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 59.0 6.40e-01 75.0% 92.3%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 55.0 5.12e-01 70.3% 56.2%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 55.0 5.63e-01 70.3% 73.0%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.82 55.0 4.19e-01 70.3% 32.6%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 64.0 5.84e-01 82.8% 86.6%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 55.0 4.60e-01 70.3% 42.9%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 66.0 5.83e-01 85.9% 85.2%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 59.0 6.32e-01 76.6% 90.7%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 55.0 5.31e-01 73.4% 64.3%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.80 57.0 5.65e-01 75.0% 72.1%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 63.0 5.65e-01 82.8% 84.7%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 5.89e-01 81.2% 81.9%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 6.04e-01 81.2% 91.0%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 5.94e-01 81.2% 88.6%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 60.0 5.59e-01 81.2% 76.2%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.62e-01 85.9% 79.8%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 58.0 6.11e-01 78.1% 100.0%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 5.57e-01 85.9% 84.1%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 59.0 5.87e-01 81.2% 91.0%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 5.49e-01 85.9% 82.2%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 59.0 4.04e-01 81.2% 29.1%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 5.86e-01 81.2% 95.2%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 57.0 5.45e-01 79.7% 77.3%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 56.0 5.83e-01 76.6% 91.4%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 60.0 5.38e-01 85.9% 83.1%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 52.0 5.80e-01 71.9% 92.0%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 5.59e-01 84.4% 81.6%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 5.92e-01 79.7% 100.0%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 5.25e-01 84.4% 71.3%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 5.54e-01 78.1% 100.0%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 5.37e-01 81.2% 98.6%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 53.0 5.58e-01 76.6% 85.7%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 57.0 4.52e-01 84.4% 53.8%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 5.16e-01 73.4% 100.0%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 4.42e-01 82.8% 49.3%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 47.0 5.35e-01 70.3% 93.3%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 52.0 5.56e-01 75.0% 92.6%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 5.41e-01 78.1% 100.0%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 52.0 5.24e-01 75.0% 100.0%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 5.30e-01 79.7% 100.0%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 50.0 4.98e-01 75.0% 69.7%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 52.0 5.76e-01 76.6% 100.0%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 4.47e-01 85.9% 53.7%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 4.69e-01 90.6% 93.8%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 4.52e-01 85.9% 51.5%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 5.11e-01 85.9% 84.1%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.07e-01 90.6% 73.7%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 54.0 5.27e-01 81.2% 94.4%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 4.66e-01 82.8% 67.3%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 4.38e-01 82.8% 59.5%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.71 56.0 4.49e-01 85.9% 71.4%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 5.07e-01 76.6% 72.7%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 4.25e-01 85.9% 50.3%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 52.0 5.06e-01 78.1% 100.0%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.71 52.0 4.37e-01 78.1% 46.8%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 50.0 3.89e-01 73.4% 48.1%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 4.79e-01 76.6% 80.8%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 4.33e-01 85.9% 51.4%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 4.32e-01 85.9% 55.1%
4fx0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 4.36e-01 82.8% 47.5%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.70 48.0 3.16e-01 70.3% 18.8%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 4.39e-01 85.9% 55.8%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 4.22e-01 85.9% 50.7%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 4.27e-01 85.9% 56.4%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 5.05e-01 78.1% 77.6%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 5.01e-01 82.8% 88.5%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 4.61e-01 93.8% 64.3%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 50.0 5.03e-01 81.2% 74.2%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 53.0 5.24e-01 84.4% 97.1%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 51.0 5.05e-01 79.7% 97.0%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 53.0 4.15e-01 85.9% 56.7%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 46.0 4.18e-01 70.3% 53.5%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 53.0 4.92e-01 85.9% 82.9%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 4.67e-01 85.9% 77.7%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 4.48e-01 85.9% 71.2%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 45.0 4.90e-01 71.9% 88.2%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.87e-01 85.9% 91.3%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 4.34e-01 95.3% 63.6%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.89e-01 81.2% 100.0%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.61 50.0 4.70e-01 90.6% 89.9%
2fq3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 4.00e-01 81.2% 76.5%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 42.0 4.15e-01 78.1% 95.5%
1xs9D00 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.56 44.0 4.13e-01 87.5% 76.5%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.54 42.0 3.83e-01 81.2% 80.5%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.54 37.0 3.40e-01 71.9% 100.0%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.53 39.0 3.63e-01 82.8% 62.1%
1f20A01 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.51 37.0 2.80e-01 78.1% 30.7%
1z6oA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 40.0 2.87e-01 89.1% 40.6%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4339706 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.86 68.0 5.93e-01 82.8% 81.1%
4541333 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 60.0 6.75e-01 73.4% 94.0%
3947249 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.85 65.0 5.92e-01 79.7% 86.3%
3944389 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.85 70.0 6.28e-01 87.5% 81.2%
3954318 101.1.1.300 alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.85 67.0 5.86e-01 82.8% 70.0%
3282047 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.85 67.0 5.70e-01 84.4% 66.0%
3946049 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 59.0 6.58e-01 73.4% 94.0%
3289886 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.84 71.0 5.92e-01 90.6% 69.5%
4998383 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.84 69.0 5.94e-01 87.5% 94.7%
3288236 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.83 66.0 5.83e-01 84.4% 74.4%
3290021 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.83 70.0 5.86e-01 90.6% 69.5%
4642479 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.83 68.0 5.89e-01 87.5% 71.6%
2792505 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.83 61.0 6.49e-01 78.1% 89.5%
3958970 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.82 67.0 6.15e-01 85.9% 81.2%
3955106 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.82 68.0 5.95e-01 87.5% 75.6%
3966995 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 68.0 5.96e-01 87.5% 83.3%
3961692 101.1.1.300 alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.82 68.0 5.83e-01 87.5% 69.5%
4282037 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.82 65.0 5.74e-01 84.4% 72.2%
4133358 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.82 59.0 4.35e-01 75.0% 31.0%
4137092 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 67.0 6.12e-01 85.9% 88.7%
3283500 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.82 60.0 6.62e-01 76.6% 98.0%
4605333 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.82 67.0 5.99e-01 85.9% 87.1%
4102958 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.82 60.0 5.97e-01 76.6% 75.4%
3280686 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.82 65.0 5.50e-01 84.4% 66.0%
3586944 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.81 61.0 5.42e-01 79.7% 70.0%
3944309 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.81 57.0 6.42e-01 73.4% 94.0%
4135755 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.81 66.0 5.79e-01 85.9% 82.2%
3942639 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.81 68.0 5.92e-01 87.5% 80.0%
4245572 101.1.8.16 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_40 0.81 58.0 5.65e-01 75.0% 68.6%
3291721 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.81 66.0 5.56e-01 85.9% 74.0%
3981659 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.81 67.0 5.86e-01 87.5% 83.3%
3975152 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.80 66.0 5.83e-01 87.5% 83.3%
3971281 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.80 55.0 5.95e-01 75.0% 83.6%
3948722 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.80 66.0 5.69e-01 87.5% 78.9%
3589664 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.80 65.0 5.83e-01 85.9% 89.4%
4380346 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.80 64.0 5.61e-01 84.4% 77.8%
4174590 101.1.2.61 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.80 60.0 6.05e-01 79.7% 86.2%
3967258 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.80 66.0 6.07e-01 87.5% 92.5%
3286796 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.80 64.0 5.50e-01 84.4% 70.5%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.80 54.0 6.20e-01 79.7% 100.0%
3975572 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.80 65.0 5.69e-01 85.9% 78.9%
4130151 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.80 63.0 5.58e-01 84.4% 77.8%
3283604 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.79 64.0 5.50e-01 87.5% 68.0%
4370821 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.79 64.0 5.78e-01 85.9% 87.1%
4010187 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.79 65.0 5.75e-01 87.5% 83.3%
3289370 101.1.1.300 alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.79 64.0 5.48e-01 87.5% 68.0%
2441957 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.79 65.0 5.73e-01 87.5% 84.4%
3946198 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.79 64.0 5.78e-01 85.9% 83.5%
3986748 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.79 65.0 5.72e-01 87.5% 83.3%
3969664 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.79 57.0 5.65e-01 76.6% 76.5%
5080109 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.79 52.0 4.96e-01 70.3% 58.7%
3946248 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.78 65.0 5.53e-01 89.1% 69.0%
3579797 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 54.0 5.01e-01 71.9% 57.5%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 59.0 5.19e-01 81.2% 91.6%
3587054 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.78 64.0 5.79e-01 87.5% 84.7%
3279636 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.78 63.0 5.54e-01 85.9% 82.2%
3942028 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.78 63.0 5.60e-01 87.5% 83.3%
3240446 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 57.0 6.09e-01 78.1% 90.9%
4031672 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.78 62.0 5.75e-01 85.9% 92.5%
4032183 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 61.0 5.70e-01 85.9% 92.5%
4588125 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 61.0 5.67e-01 85.9% 96.2%
3941586 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 61.0 5.61e-01 84.4% 91.3%
5014584 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.77 56.0 5.05e-01 76.6% 98.8%
3946548 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 61.0 5.41e-01 85.9% 82.2%
2759 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.76 58.0 5.79e-01 81.2% 92.3%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 55.0 5.72e-01 78.1% 81.7%
4414382 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.76 59.0 5.32e-01 82.8% 76.5%
3977861 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.76 59.0 5.34e-01 82.8% 81.2%
3953111 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.76 60.0 5.84e-01 85.9% 91.4%
3166394 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.75 62.0 5.31e-01 89.1% 81.0%
5073937 101.1.2.899 alpha arrays › HTH › HTH › winged helix domain › Zn_Ribbon_1 0.75 53.0 4.28e-01 75.0% 40.9%
3976103 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.75 57.0 5.75e-01 81.2% 96.9%
3976506 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.75 54.0 5.15e-01 76.6% 78.7%
5055912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 53.0 5.19e-01 75.0% 71.4%
1035813 101.1.6.2 alpha arrays › HTH › HTH › TrpR › HTH_7 0.74 53.0 5.74e-01 76.6% 92.3%
3166400 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.74 53.0 5.34e-01 76.6% 75.4%
5004314 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.73 49.0 4.66e-01 70.3% 58.7%
3941182 101.1.1.52 alpha arrays › HTH › HTH › Three-helical HTH › BrkDBD 0.73 50.0 5.06e-01 75.0% 70.8%
5040079 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 55.0 5.22e-01 81.2% 81.3%
5021231 101.1.1.544 alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 0.73 56.0 5.03e-01 81.2% 90.6%
4944887 101.1.1.546 alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.72 58.0 4.65e-01 85.9% 50.0%
5077607 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.72 55.0 5.71e-01 81.2% 88.3%
4966151 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.72 56.0 5.34e-01 84.4% 96.0%
3958096 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 51.0 4.57e-01 75.0% 55.6%
5057140 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 53.0 5.47e-01 81.2% 100.0%
4947595 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 53.0 5.08e-01 81.2% 77.3%
3191582 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.70 56.0 4.50e-01 89.1% 97.7%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.70 51.0 4.55e-01 78.1% 54.7%
4978146 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.70 55.0 5.35e-01 85.9% 90.0%
4929413 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.70 52.0 4.78e-01 81.2% 80.0%
4479119 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.69 49.0 5.20e-01 75.0% 87.3%
5047083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 52.0 4.98e-01 82.8% 96.0%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.69 51.0 4.99e-01 82.8% 72.9%
4968115 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 53.0 5.16e-01 85.9% 91.4%
5077990 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.66 54.0 4.91e-01 93.8% 94.4%
5038587 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.66 44.0 4.60e-01 71.9% 75.0%
5047331 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 53.0 4.84e-01 93.8% 96.7%
D4 medium residues 481-536
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k2sB00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.61 37.0 3.80e-01 82.1% 61.8%
1nioA01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.58 43.0 3.14e-01 80.4% 69.8%
3sjnA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 42.0 3.33e-01 76.8% 83.2%
4lb0A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.57 47.0 3.47e-01 96.4% 50.6%
1v9kA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.57 39.0 2.70e-01 75.0% 59.5%
3mlqH00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 33.0 3.62e-01 98.2% 76.2%
2k7iA01 3.30.160.160 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like 0.55 30.0 3.24e-01 71.4% 54.2%
1b69A00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.52 36.0 3.45e-01 75.0% 89.9%
3e8tA00 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.51 38.0 2.58e-01 80.4% 61.1%
6z9uA01 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.51 35.0 3.14e-01 83.9% 50.6%
3plsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 36.0 3.06e-01 80.4% 68.3%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2028351 716.1.1.3 beta duplicates or obligate multimers › Trimeric autotransporter adhesin Trp ring domain › Trimeric autotransporter adhesin Trp ring domain › Trimeric autotransporter adhesin Trp ring domain › Hia_Tpr_ring_dom 0.59 36.0 3.81e-01 80.4% 70.0%
3962782 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.58 34.0 2.50e-01 89.3% 20.0%
3342267 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 43.0 3.08e-01 87.5% 57.2%
3718125 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.55 36.0 2.31e-01 73.2% 13.5%
5051211 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.55 40.0 2.50e-01 80.4% 74.9%
3593375 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 40.0 3.92e-01 78.6% 91.7%
3331374 1.1.1.28 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N 0.55 41.0 2.52e-01 82.1% 35.4%
4854385 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.55 39.0 3.41e-01 75.0% 50.0%
3393267 7579.1.1.2 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase 0.54 32.0 2.04e-01 100.0% 9.7%
3256058 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 42.0 3.35e-01 91.1% 48.0%
3591474 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.53 35.0 2.43e-01 71.4% 27.7%
3601930 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.53 39.0 2.68e-01 78.6% 30.8%
5077629 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 37.0 4.04e-01 78.6% 95.6%
3451337 1.1.1.10 beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_N 0.52 36.0 2.58e-01 73.2% 31.2%
3655199 275.1.1.1 a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › RNA_pol_Rpb1_2 0.52 40.0 3.20e-01 85.7% 78.3%
3688597 2011.2.1.0 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like 0.51 37.0 2.63e-01 78.6% 44.7%
3738064 304.112.1.0 a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.51 35.0 2.89e-01 73.2% 65.0%