←Back to structures
NC_042056.1__YP_009617106.1__FDI85_gp095__00180
Bact-VirNC_042056.1__YP_009617106.1__FDI85_gp095__00180
Identity
- Accession:
- NC_042056 ↗
- Kingdom:
- phage
Quality
85.3
mean pLDDT
Taxonomy
TaxID: 1883375
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-65_159-180
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o0pA00 | 3.20.170.20 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Protein of unknown function DUF952 | 0.67 | 60.0 | 5.45e-01 | 98.8% | 80.7% |
| 1vi7A02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 37.0 | 4.04e-01 | 94.2% | 70.4% |
| 2wbmA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 38.0 | 4.23e-01 | 94.2% | 77.1% |
| 2vd3A03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 36.0 | 3.92e-01 | 94.2% | 70.3% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 41.0 | 4.12e-01 | 97.7% | 71.9% |
| 1i1gA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.57 | 37.0 | 3.96e-01 | 94.2% | 75.3% |
| 5wt3A01 | 3.30.70.2580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 33.0 | 3.76e-01 | 89.5% | 76.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026970 | 304.126.1.2 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V-ATPase_C | 0.56 | 40.0 | 3.59e-01 | 94.2% | 54.8% |
| 3574215 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.53 | 41.0 | 3.18e-01 | 86.0% | 83.7% |
| 3959355 | 304.8.1.107 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALO | 0.52 | 42.0 | 3.51e-01 | 87.2% | 90.3% |
| 3350776 | 304.5.1.23 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › V_ATPase_I | 0.51 | 37.0 | 3.85e-01 | 93.0% | 81.2% |
D2
high
residues 66-157
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n93X02 | 1.10.3050.10 | Mainly Alpha › Orthogonal Bundle › borna disease virus nucleoprotein, domain 2 › borna disease virus nucleoprotein, domain 2 | 0.56 | 40.0 | 3.65e-01 | 75.0% | 68.5% |
| 4d1eA04 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 33.0 | 3.69e-01 | 87.0% | 79.1% |