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NC_042056.1__YP_009617106.1__FDI85_gp095__00180

Bact-Vir

NC_042056.1__YP_009617106.1__FDI85_gp095__00180

Identity

Accession:
NC_042056 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-65_159-180
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o0pA00 3.20.170.20 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Protein of unknown function DUF952 0.67 60.0 5.45e-01 98.8% 80.7%
1vi7A02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 37.0 4.04e-01 94.2% 70.4%
2wbmA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 38.0 4.23e-01 94.2% 77.1%
2vd3A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 36.0 3.92e-01 94.2% 70.3%
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 41.0 4.12e-01 97.7% 71.9%
1i1gA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.57 37.0 3.96e-01 94.2% 75.3%
5wt3A01 3.30.70.2580 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 33.0 3.76e-01 89.5% 76.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4026970 304.126.1.2 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V-ATPase_C 0.56 40.0 3.59e-01 94.2% 54.8%
3574215 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.53 41.0 3.18e-01 86.0% 83.7%
3959355 304.8.1.107 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALO 0.52 42.0 3.51e-01 87.2% 90.3%
3350776 304.5.1.23 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › V_ATPase_I 0.51 37.0 3.85e-01 93.0% 81.2%
D2 high residues 66-157
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n93X02 1.10.3050.10 Mainly Alpha › Orthogonal Bundle › borna disease virus nucleoprotein, domain 2 › borna disease virus nucleoprotein, domain 2 0.56 40.0 3.65e-01 75.0% 68.5%
4d1eA04 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 33.0 3.69e-01 87.0% 79.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3606924 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 42.0 3.47e-01 96.7% 45.0%