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NC_042082.1__YP_009619990.1__FDJ07_gp125__00095

Bact-Vir

NC_042082.1__YP_009619990.1__FDJ07_gp125__00095

Identity

Accession:
NC_042082 ↗
Kingdom:
phage

Quality

84.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-194
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01694.29 best Rhomboid 64.5 1.70e-17 80.0% 95.1%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nr9A00 1.20.1540.10 Mainly Alpha › Up-down Bundle › Rhomboid-like fold › Rhomboid-like 0.85 82.0 7.72e-01 100.0% 90.6%
2xtuA00 1.20.1540.10 Mainly Alpha › Up-down Bundle › Rhomboid-like fold › Rhomboid-like 0.82 78.0 7.54e-01 100.0% 96.1%
1jkwA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.56 39.0 3.84e-01 81.8% 65.3%
3k7dA01 1.20.120.1510 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.54 34.0 4.05e-01 93.9% 92.9%
2f2cA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 33.0 3.95e-01 90.3% 94.3%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 35.0 4.12e-01 78.8% 100.0%
7cj3A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.50 42.0 3.66e-01 91.5% 93.0%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4947928 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.93 90.0 8.44e-01 100.0% 98.5%
4023971 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.92 89.0 8.03e-01 100.0% 90.6%
5003867 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.92 89.0 8.22e-01 100.0% 89.0%
4955301 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.92 89.0 7.15e-01 100.0% 69.8%
4978465 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.92 89.0 8.19e-01 100.0% 95.0%
5031991 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.92 88.0 8.17e-01 100.0% 94.5%
5042736 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.91 88.0 8.40e-01 100.0% 97.3%
4937260 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.91 88.0 7.96e-01 100.0% 93.3%
3742842 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.91 88.0 8.11e-01 100.0% 96.5%
5058047 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.91 88.0 8.28e-01 100.0% 95.3%
5039705 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.91 88.0 7.79e-01 100.0% 89.5%
3785195 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.91 87.0 7.50e-01 100.0% 76.7%
4421392 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.91 87.0 7.76e-01 100.0% 91.8%
5000985 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.91 87.0 8.15e-01 100.0% 94.4%
5040821 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.91 87.0 7.97e-01 100.0% 94.6%
3314315 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.90 87.0 8.12e-01 100.0% 95.4%
3849112 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.90 86.0 7.40e-01 100.0% 75.7%
3744831 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.90 86.0 7.33e-01 100.0% 78.4%
3456631 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.90 87.0 7.56e-01 100.0% 82.2%
4928786 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.90 86.0 7.74e-01 100.0% 95.8%
3265701 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.89 85.0 8.09e-01 100.0% 98.9%
5022259 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.89 85.0 8.17e-01 100.0% 97.3%
5058498 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.89 85.0 8.27e-01 100.0% 99.4%
3496079 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.89 85.0 7.82e-01 100.0% 91.7%
3600204 5081.1.1.0 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like 0.89 85.0 7.99e-01 100.0% 96.9%
4932576 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.89 86.0 7.91e-01 100.0% 93.0%
3631632 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.89 85.0 7.17e-01 100.0% 76.1%
4982322 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.88 84.0 7.50e-01 100.0% 88.2%
3723065 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.88 84.0 6.82e-01 100.0% 75.0%
5069469 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.87 84.0 7.47e-01 100.0% 88.2%
3225775 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.87 83.0 7.25e-01 100.0% 80.9%
4942502 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.87 83.0 7.63e-01 100.0% 89.3%
3926356 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.87 83.0 7.15e-01 100.0% 79.2%
3284826 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.87 83.0 7.41e-01 100.0% 79.5%
4255175 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.86 83.0 6.92e-01 100.0% 78.1%
4027249 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.86 83.0 7.31e-01 100.0% 81.8%
5038864 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.86 82.0 7.60e-01 100.0% 89.0%
3406966 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.86 82.0 7.25e-01 100.0% 85.8%
3742023 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.85 82.0 7.35e-01 100.0% 94.0%
4247 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.85 82.0 7.77e-01 100.0% 92.1%
3241943 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.85 82.0 7.31e-01 100.0% 85.0%
3899195 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.85 81.0 7.63e-01 100.0% 97.9%
3577038 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.85 82.0 7.17e-01 100.0% 83.5%
3302941 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.85 82.0 7.49e-01 100.0% 84.9%
3787939 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.85 81.0 6.92e-01 99.4% 81.6%
3438721 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.85 81.0 7.47e-01 100.0% 84.4%
3379646 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.85 81.0 6.76e-01 100.0% 79.2%
3261517 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.85 66.0 6.89e-01 80.6% 99.4%
3988861 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.85 81.0 7.32e-01 100.0% 84.2%
3701869 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.85 81.0 7.35e-01 100.0% 97.6%
3845295 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.85 81.0 6.98e-01 100.0% 80.8%
3690311 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.85 70.0 6.11e-01 85.5% 83.3%
4029621 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 81.0 7.27e-01 100.0% 86.5%
4946808 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 81.0 7.58e-01 100.0% 96.4%
3923227 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 80.0 7.60e-01 99.4% 92.6%
5078124 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 81.0 7.81e-01 99.4% 96.7%
3643677 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 81.0 6.90e-01 100.0% 87.3%
3491023 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 81.0 6.86e-01 100.0% 82.8%
3563907 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 81.0 6.84e-01 100.0% 74.8%
4025858 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 81.0 7.32e-01 100.0% 89.0%
3475796 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.84 80.0 7.50e-01 100.0% 98.5%
3611515 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 80.0 7.45e-01 100.0% 95.5%
3262241 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 80.0 7.37e-01 100.0% 89.2%
4057139 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 80.0 7.70e-01 100.0% 94.1%
3248617 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 80.0 7.06e-01 100.0% 83.3%
3934092 5081.1.1.0 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like 0.84 81.0 7.80e-01 100.0% 91.7%
3067085 5081.1.1.0 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like 0.84 80.0 7.79e-01 100.0% 97.8%
4988448 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 80.0 7.87e-01 100.0% 97.7%
4978747 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.84 80.0 7.84e-01 100.0% 96.6%
4954820 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.83 80.0 7.86e-01 100.0% 97.7%
5014154 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.83 80.0 7.58e-01 100.0% 93.2%
3238747 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.83 80.0 7.72e-01 100.0% 95.6%
3807701 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.83 79.0 7.02e-01 100.0% 84.4%
4024520 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.83 80.0 6.95e-01 100.0% 79.8%
3399386 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.83 79.0 7.52e-01 100.0% 93.7%
4079748 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.83 79.0 7.41e-01 100.0% 90.8%
3954015 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.83 79.0 7.38e-01 100.0% 91.3%
3505334 5081.1.1.4 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 0.83 79.0 7.23e-01 100.0% 99.0%
3798293 5081.1.1.0 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like 0.83 79.0 7.13e-01 100.0% 82.8%
4032972 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.83 79.0 7.49e-01 100.0% 92.6%
3392721 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.83 79.0 6.83e-01 100.0% 76.2%
3245826 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.82 79.0 7.15e-01 100.0% 85.2%
3991492 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.82 78.0 6.95e-01 100.0% 85.7%
4030274 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.82 79.0 7.76e-01 100.0% 99.4%
3830489 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.82 78.0 7.34e-01 100.0% 98.5%
4585909 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.82 78.0 7.10e-01 100.0% 88.0%
5068311 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.82 73.0 7.28e-01 100.0% 90.6%
4025642 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.81 78.0 7.38e-01 100.0% 98.4%
5011657 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.81 77.0 7.59e-01 100.0% 98.3%
4982980 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.81 78.0 7.68e-01 100.0% 98.8%
4991388 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.81 77.0 7.49e-01 100.0% 95.6%
3819305 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.81 77.0 7.54e-01 100.0% 96.6%
3339208 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.80 76.0 6.84e-01 100.0% 85.0%
4466613 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.80 76.0 6.71e-01 100.0% 78.9%
4665476 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.79 75.0 6.80e-01 100.0% 86.0%
3701629 5081.1.1.0 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like 0.79 75.0 7.40e-01 99.4% 99.4%
3856302 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.79 74.0 6.94e-01 100.0% 93.5%
3883917 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.79 74.0 6.90e-01 100.0% 90.0%