Back to structures

NC_042087.1__YP_009620406.1__FDJ12_gp79__00061

Bact-Vir

NC_042087.1__YP_009620406.1__FDJ12_gp79__00061

Identity

Accession:
NC_042087 ↗
Kingdom:
phage

Quality

80.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-46
PDB
Domain cluster: representative
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a7gE00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.77 64.0 5.32e-01 100.0% 100.0%
1d2oA01 2.60.40.1140 Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain 0.75 67.0 4.97e-01 100.0% 45.8%
2wshA00 3.40.1440.40 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › 0.74 66.0 4.62e-01 100.0% 62.7%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 61.0 4.69e-01 100.0% 85.0%
2gx8A02 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 61.0 4.79e-01 100.0% 93.9%
3skvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.71 61.0 4.14e-01 97.7% 28.6%
1hnfA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 57.0 4.71e-01 100.0% 49.4%
1z0sA02 2.60.200.30 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 0.70 58.0 4.19e-01 95.3% 60.8%
1gttA01 3.90.850.10 Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain 0.70 61.0 3.85e-01 97.7% 31.8%
4haoA02 2.60.200.30 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 0.70 58.0 4.17e-01 95.3% 57.6%
2nydA02 2.20.28.300 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.70 51.0 5.23e-01 100.0% 87.8%
3arxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 60.0 4.49e-01 100.0% 39.6%
2w1nA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 60.0 4.88e-01 100.0% 54.9%
3lsoA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 58.0 4.65e-01 100.0% 52.2%
2vsdA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 59.0 4.62e-01 100.0% 50.5%
2l0dA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 58.0 4.32e-01 97.7% 46.5%
5zruA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 59.0 4.04e-01 100.0% 44.2%
1pk6C00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.68 58.0 4.16e-01 100.0% 37.2%
1yq2A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 56.0 4.23e-01 100.0% 57.4%
1v8hA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 57.0 4.29e-01 97.7% 43.4%
1iamA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 55.0 4.33e-01 100.0% 46.1%
3pddA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 58.0 4.47e-01 100.0% 43.6%
4devD01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 56.0 4.07e-01 97.7% 36.0%
2w3jA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 58.0 4.08e-01 100.0% 36.5%
2kl6A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 56.0 4.28e-01 100.0% 45.4%
2xvlA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.66 56.0 3.91e-01 97.7% 42.2%
1zxqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 55.0 4.23e-01 100.0% 48.6%
5h4cB00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.66 56.0 4.00e-01 100.0% 36.3%
2waoA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.66 55.0 4.20e-01 100.0% 40.5%
2wngA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 56.0 4.50e-01 97.7% 56.3%
1wzoB02 3.90.850.10 Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain 0.66 55.0 3.61e-01 97.7% 33.8%
2go8A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 55.0 4.69e-01 97.7% 100.0%
3afoB02 2.60.200.30 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 0.66 54.0 3.83e-01 95.3% 100.0%
1etb200 2.60.40.180 Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain 0.66 54.0 4.05e-01 97.7% 43.6%
3cmgA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 54.0 4.44e-01 97.7% 50.6%
1edqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 56.0 4.25e-01 100.0% 41.1%
2jveA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.65 53.0 4.65e-01 100.0% 90.1%
5tipA01 2.70.9.10 Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Adenovirus Type 2 Hexon, domain 4 0.65 54.0 3.59e-01 97.7% 47.3%
2vvfA01 2.60.120.730 Mainly Beta › Sandwich › Jelly Rolls › 0.64 53.0 3.76e-01 95.3% 55.3%
1rj8A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 54.0 3.85e-01 100.0% 36.4%
1ollA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 55.0 4.31e-01 100.0% 52.6%
5jipA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 55.0 4.43e-01 100.0% 54.4%
3wnoA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 54.0 3.93e-01 100.0% 39.2%
1vcaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 52.0 4.04e-01 100.0% 49.1%
4qawH03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 53.0 3.85e-01 100.0% 38.1%
3d3aA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 52.0 3.76e-01 97.7% 31.3%
4fkeA03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 50.0 4.10e-01 95.3% 50.6%
2q1mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.62 51.0 3.85e-01 97.7% 37.1%
3n0aA02 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 52.0 3.77e-01 100.0% 38.5%
3tzyA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.61 49.0 4.33e-01 97.7% 92.9%
4p02B01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 52.0 3.73e-01 97.7% 36.1%
3eb7A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 52.0 3.57e-01 100.0% 36.6%
4e8dA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 48.0 3.50e-01 97.7% 31.2%
3abzA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 47.0 3.28e-01 93.0% 51.5%
4madA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 48.0 3.52e-01 97.7% 31.3%
1wckA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 49.0 3.56e-01 100.0% 62.5%
3fn9A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 45.0 3.22e-01 97.7% 29.6%
4p02B03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 48.0 3.44e-01 100.0% 36.4%
1pgsA02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.57 47.0 3.22e-01 100.0% 40.0%
1k92A02 3.90.1260.10 Alpha Beta › Alpha-Beta Complex › Argininosuccinate synthetase, chain A, domain 2 › Argininosuccinate synthetase, chain A, domain 2 0.57 42.0 2.68e-01 79.1% 26.5%
1wh2A01 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.57 43.0 4.04e-01 95.3% 65.6%
2okxA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 45.0 3.14e-01 100.0% 29.8%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 45.0 3.08e-01 100.0% 60.9%
2rilA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 46.0 3.73e-01 100.0% 94.7%
7sf2D01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 44.0 3.10e-01 100.0% 25.8%
3ks7A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.11e-01 97.7% 54.7%
3rpfC00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.55 43.0 3.77e-01 93.0% 81.9%
4tq1A02 3.10.20.620 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 42.0 3.52e-01 100.0% 78.0%
3r5xD02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 46.0 3.13e-01 100.0% 47.7%
3w5nA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 42.0 2.99e-01 97.7% 29.9%
3r7wC02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 35.0 2.80e-01 72.1% 38.3%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5070413 4012.1.1.0 a+b two layers › SSHS domain › SSHS domain in type II DNA topoisomerase › SSHS domain in type II DNA topoisomerase 0.84 67.0 6.94e-01 90.7% 92.5%
4186857 4012.1.1.0 a+b two layers › SSHS domain › SSHS domain in type II DNA topoisomerase › SSHS domain in type II DNA topoisomerase 0.84 71.0 7.34e-01 97.7% 100.0%
4531584 4012.1.1.0 a+b two layers › SSHS domain › SSHS domain in type II DNA topoisomerase › SSHS domain in type II DNA topoisomerase 0.80 64.0 6.61e-01 97.7% 100.0%
3974805 2498.1.1.71 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Aminopep 0.78 69.0 4.05e-01 100.0% 18.2%
3297748 4076.1.1.2 a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI 0.76 66.0 6.08e-01 100.0% 76.4%
3588351 11.1.4.12 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Cna_B 0.74 66.0 5.27e-01 100.0% 57.6%
2796408 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.74 59.0 4.69e-01 93.0% 43.7%
4682045 11.1.1.203 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 0.72 64.0 4.73e-01 100.0% 46.4%
5001423 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 60.0 4.83e-01 100.0% 48.2%
4929359 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.72 57.0 5.38e-01 97.7% 72.7%
3509473 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.72 59.0 4.50e-01 100.0% 40.0%
3935475 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.71 63.0 3.83e-01 100.0% 24.6%
5050378 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 60.0 4.74e-01 97.7% 50.0%
5050380 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 59.0 4.70e-01 97.7% 50.0%
4987216 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 60.0 4.61e-01 100.0% 51.0%
2833278 302.3.1.1 a+b two layers › Reverse ferredoxin › a+b domain in low-molecular-weight S-layer protein › a+b domain in low-molecular-weight S-layer protein › LMWSLP_N 0.69 57.0 4.45e-01 95.3% 58.2%
4937921 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 59.0 4.48e-01 100.0% 47.6%
3991243 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 60.0 3.59e-01 100.0% 14.7%
5067933 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.68 58.0 4.43e-01 100.0% 47.6%
5018125 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.68 58.0 4.37e-01 100.0% 45.5%
5048160 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 57.0 4.56e-01 97.7% 53.3%
3522926 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.67 60.0 4.61e-01 100.0% 45.3%
5060986 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.67 57.0 4.51e-01 100.0% 54.7%
5049719 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 58.0 4.52e-01 100.0% 48.4%
2321592 11.1.1.246 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 0.67 58.0 4.45e-01 100.0% 42.2%
3928566 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 56.0 3.82e-01 100.0% 25.3%
3902170 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.67 55.0 4.08e-01 100.0% 38.4%
4981175 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 56.0 4.17e-01 97.7% 47.0%
5081982 11.1.1.246 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 0.66 54.0 4.27e-01 100.0% 44.4%
4957041 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 55.0 4.56e-01 100.0% 54.1%
3863752 11.1.1.178 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.65 54.0 4.40e-01 100.0% 48.2%
3193810 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 53.0 3.74e-01 100.0% 38.7%
5001459 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 54.0 4.29e-01 100.0% 45.6%
2995198 10.2.1.54 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N 0.65 54.0 3.59e-01 97.7% 46.8%
5069351 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.65 53.0 4.23e-01 97.7% 50.5%
169110 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.65 53.0 4.67e-01 100.0% 91.4%
4092773 10.32.1.18 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C 0.65 57.0 3.94e-01 100.0% 40.7%
5070442 11.1.1.246 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 0.64 53.0 4.23e-01 100.0% 44.4%
5081981 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 54.0 4.38e-01 100.0% 48.2%
2995054 10.2.1.54 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_N 0.64 53.0 3.43e-01 97.7% 41.0%
5069348 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 53.0 4.23e-01 100.0% 45.6%
3471296 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.64 54.0 3.91e-01 100.0% 46.9%
3545336 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.63 52.0 3.67e-01 97.7% 35.7%
5033783 11.1.1.246 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 0.63 54.0 4.28e-01 100.0% 46.3%
3738582 11.1.1.598 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › RSC4_Ig_like 0.63 52.0 3.69e-01 100.0% 39.3%
4943498 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.63 53.0 4.88e-01 100.0% 75.0%
4367656 10.32.1.44 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM-like 0.63 51.0 3.54e-01 100.0% 35.7%
3229200 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.62 52.0 3.67e-01 100.0% 40.7%
3360663 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 50.0 3.49e-01 100.0% 28.5%
4123628 304.56.1.2 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.61 47.0 4.14e-01 100.0% 88.7%
4269845 11.1.1.14 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.61 50.0 3.85e-01 100.0% 58.2%
3385123 10.32.1.76 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_gal-bd 0.60 49.0 3.44e-01 100.0% 29.4%
3897315 382.1.1.2 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP 0.60 48.0 4.11e-01 100.0% 90.0%
3192812 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 46.0 3.12e-01 100.0% 25.0%
5017304 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 50.0 3.75e-01 97.7% 41.8%
3223789 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 47.0 3.50e-01 100.0% 59.2%
3416102 5.1.4.344 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_SCAP 0.55 45.0 2.65e-01 100.0% 10.6%
4940593 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 42.0 2.99e-01 100.0% 34.1%
3614606 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 45.0 3.35e-01 97.7% 88.6%
D2 high residues 55-109
PDB
Domain cluster: representative
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.92 69.0 6.79e-01 80.0% 96.6%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.87 64.0 6.31e-01 78.2% 98.3%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.86 66.0 6.88e-01 81.8% 98.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.85 64.0 6.56e-01 80.0% 96.2%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 65.0 6.29e-01 81.8% 98.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 63.0 6.21e-01 80.0% 94.9%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.84 64.0 5.76e-01 81.8% 78.7%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 62.0 6.50e-01 78.2% 98.0%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 59.0 6.33e-01 74.5% 100.0%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 62.0 6.13e-01 80.0% 98.3%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 62.0 6.06e-01 80.0% 91.7%
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 52.0 5.05e-01 70.9% 58.1%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 61.0 5.95e-01 80.0% 95.1%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.82 63.0 6.56e-01 83.6% 94.1%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 63.0 5.51e-01 81.8% 72.2%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.82 71.0 5.03e-01 98.2% 73.7%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.82 70.0 6.21e-01 92.7% 71.4%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 62.0 6.25e-01 81.8% 87.5%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 61.0 5.92e-01 80.0% 91.9%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.82 70.0 7.11e-01 98.2% 96.3%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.82 67.0 7.03e-01 90.9% 98.0%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 73.0 6.70e-01 98.2% 95.7%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 69.0 6.04e-01 92.7% 77.8%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.82 61.0 5.70e-01 80.0% 88.1%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 63.0 5.78e-01 83.6% 82.9%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 59.0 5.89e-01 78.2% 98.2%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 62.0 5.89e-01 81.8% 95.3%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 56.0 5.56e-01 72.7% 100.0%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.81 62.0 5.73e-01 81.8% 82.4%
2e5kA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 61.0 5.83e-01 81.8% 96.9%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 61.0 5.80e-01 81.8% 89.1%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 59.0 5.27e-01 80.0% 82.1%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.80 61.0 6.18e-01 81.8% 88.9%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 60.0 5.87e-01 81.8% 95.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 6.43e-01 100.0% 95.8%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 70.0 6.39e-01 100.0% 76.7%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 60.0 4.95e-01 83.6% 57.1%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.78 57.0 6.22e-01 78.2% 97.8%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 56.0 5.58e-01 76.4% 100.0%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.78 62.0 6.36e-01 85.5% 90.4%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 60.0 6.16e-01 85.5% 92.5%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 57.0 5.06e-01 78.2% 77.6%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 55.0 4.58e-01 76.4% 67.7%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 58.0 6.13e-01 83.6% 100.0%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 65.0 6.43e-01 96.4% 93.2%
2e6nA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 67.0 5.42e-01 100.0% 52.9%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 57.0 5.21e-01 83.6% 87.8%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 66.0 6.14e-01 100.0% 94.3%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 65.0 5.60e-01 98.2% 79.1%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 63.0 6.12e-01 96.4% 90.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 64.0 5.82e-01 98.2% 74.0%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 58.0 5.94e-01 90.9% 98.1%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 54.0 5.65e-01 81.8% 95.8%
3vsfC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.71 56.0 3.47e-01 89.1% 26.9%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 62.0 5.11e-01 100.0% 56.0%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 5.36e-01 98.2% 66.3%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.68 51.0 5.30e-01 83.6% 98.0%
1irxA02 2.30.30.300 Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like 0.68 49.0 5.41e-01 80.0% 100.0%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 53.0 4.17e-01 87.3% 79.1%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.64 49.0 4.10e-01 87.3% 77.9%
6eufA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 52.0 3.31e-01 94.5% 28.2%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 50.0 3.78e-01 89.1% 52.2%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 45.0 4.32e-01 80.0% 84.8%
1sr4A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 43.0 3.16e-01 80.0% 83.2%
1e2rA02 2.140.10.20 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 0.59 44.0 2.70e-01 87.3% 20.6%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.58 44.0 3.08e-01 87.3% 49.0%
5c2vB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 45.0 2.80e-01 89.1% 20.5%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.57 48.0 3.72e-01 100.0% 78.2%
2m47A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 44.0 3.17e-01 85.5% 44.2%
7mhwA01 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.56 45.0 3.92e-01 92.7% 100.0%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.55 42.0 3.47e-01 87.3% 87.3%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 41.0 2.84e-01 90.9% 37.2%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.53 42.0 2.68e-01 92.7% 91.5%
4xcmA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.53 42.0 3.44e-01 96.4% 47.2%
3pijA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.52 42.0 3.25e-01 98.2% 86.6%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 41.0 2.78e-01 92.7% 40.6%
2avtB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.51 40.0 2.98e-01 92.7% 47.1%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.50 39.0 2.68e-01 92.7% 40.4%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3475965 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.89 66.0 7.18e-01 78.2% 100.0%
3211839 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.88 76.0 6.95e-01 92.7% 91.4%
3789233 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.88 65.0 6.14e-01 78.2% 86.2%
3849311 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.88 69.0 6.73e-01 83.6% 96.7%
3188732 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.88 67.0 6.01e-01 81.8% 76.0%
4082863 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.87 67.0 6.14e-01 81.8% 82.9%
3842441 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.87 63.0 6.12e-01 76.4% 91.7%
3222195 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.87 70.0 6.63e-01 87.3% 93.8%
3928262 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 69.0 6.70e-01 85.5% 98.3%
3494671 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 57.0 6.31e-01 70.9% 84.4%
4680376 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.86 71.0 7.20e-01 96.4% 89.1%
279006 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.86 66.0 6.10e-01 81.8% 85.5%
3233511 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.86 62.0 6.28e-01 76.4% 100.0%
3633434 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.86 63.0 5.82e-01 78.2% 80.0%
3723808 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.86 65.0 6.10e-01 80.0% 90.8%
4003123 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.86 66.0 6.20e-01 81.8% 89.2%
3537417 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 66.0 7.18e-01 83.6% 100.0%
3347851 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.85 70.0 6.43e-01 92.7% 70.0%
3918767 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.85 66.0 5.65e-01 83.6% 68.2%
3264806 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 71.0 7.43e-01 92.7% 100.0%
3498357 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.85 65.0 5.94e-01 81.8% 82.9%
3170397 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 62.0 5.44e-01 78.2% 70.0%
4171510 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 65.0 5.65e-01 81.8% 72.5%
3930461 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 64.0 5.77e-01 81.8% 77.3%
3503771 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 68.0 6.43e-01 87.3% 92.3%
3620934 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.84 66.0 5.75e-01 83.6% 73.8%
4003171 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 66.0 5.73e-01 83.6% 72.5%
3920103 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 63.0 5.29e-01 80.0% 63.3%
3625911 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 63.0 5.93e-01 80.0% 89.2%
3476188 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 63.0 5.61e-01 80.0% 76.0%
167151 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.84 61.0 6.07e-01 78.2% 98.2%
3188199 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.83 64.0 5.58e-01 81.8% 72.5%
3935130 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 67.0 6.79e-01 87.3% 94.5%
3669492 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.83 71.0 5.15e-01 92.7% 45.0%
3275623 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.83 62.0 5.33e-01 80.0% 67.1%
3480822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 65.0 6.81e-01 83.6% 96.0%
3546762 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.83 62.0 5.71e-01 80.0% 81.4%
3775595 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.83 69.0 6.47e-01 89.1% 93.8%
3416133 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.83 63.0 5.67e-01 81.8% 77.3%
3936926 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 69.0 6.53e-01 90.9% 86.2%
3535424 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.82 66.0 6.04e-01 85.5% 85.7%
3483363 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 62.0 5.84e-01 80.0% 80.0%
3619598 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.82 62.0 5.28e-01 80.0% 67.1%
3234947 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.82 62.0 5.91e-01 81.8% 90.8%
3315100 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 72.0 6.82e-01 96.4% 81.5%
3340900 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 73.0 6.90e-01 100.0% 83.1%
3927460 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 61.0 6.37e-01 80.0% 100.0%
4012096 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 61.0 4.82e-01 80.0% 51.8%
3911241 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.82 71.0 5.73e-01 100.0% 52.0%
147681 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.82 66.0 6.30e-01 87.3% 93.7%
3612184 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 71.0 6.88e-01 94.5% 88.3%
3695780 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.82 64.0 5.57e-01 83.6% 72.5%
3820064 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.82 70.0 6.09e-01 94.5% 63.7%
3256498 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 69.0 6.90e-01 90.9% 94.5%
3452043 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 72.0 5.28e-01 96.4% 39.3%
3333322 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.81 71.0 5.20e-01 96.4% 38.5%
3577505 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 74.0 6.34e-01 100.0% 65.9%
3465976 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 70.0 6.65e-01 96.4% 81.5%
3393360 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.80 69.0 5.36e-01 100.0% 45.2%
4002679 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.80 72.0 5.49e-01 98.2% 46.7%
3393436 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.80 72.0 5.61e-01 98.2% 49.1%
3931993 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 67.0 6.58e-01 92.7% 88.3%
3581143 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.80 66.0 6.28e-01 90.9% 78.5%
3671396 4.1.1.316 beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.80 71.0 6.45e-01 98.2% 80.8%
3558774 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.79 70.0 6.79e-01 96.4% 96.7%
3832128 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 69.0 5.73e-01 96.4% 55.8%
3759402 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 62.0 5.90e-01 85.5% 93.8%
3511551 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 68.0 6.68e-01 96.4% 100.0%
3501699 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 71.0 6.18e-01 100.0% 67.5%
3429682 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 67.0 6.03e-01 96.4% 69.3%
3275832 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.79 65.0 6.50e-01 90.9% 100.0%
3828348 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 70.0 6.59e-01 100.0% 83.1%
3359784 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.78 70.0 6.58e-01 100.0% 83.1%
3774821 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 67.0 6.53e-01 94.5% 96.7%
3663761 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 69.0 5.48e-01 96.4% 50.5%
3555931 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.78 71.0 5.51e-01 100.0% 89.6%
3463181 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 70.0 6.48e-01 100.0% 78.6%
3482225 4.1.1.300 beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.78 68.0 5.12e-01 96.4% 44.6%
3508441 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 69.0 5.72e-01 98.2% 60.0%
3707347 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 67.0 6.72e-01 94.5% 96.4%
3313119 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.78 69.0 6.05e-01 100.0% 67.5%
3815479 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 70.0 6.28e-01 100.0% 74.7%
3243256 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 67.0 4.68e-01 96.4% 33.1%
3877478 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.77 68.0 5.51e-01 96.4% 54.0%
3662072 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 68.0 5.24e-01 98.2% 45.0%
3885050 4.1.1.360 beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.77 67.0 4.65e-01 96.4% 33.7%
3496659 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 68.0 6.68e-01 98.2% 93.3%
3801791 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 67.0 6.37e-01 98.2% 83.1%
4269256 4.1.1.245 beta barrels › SH3 › SH3 › SH3 › SspH 0.77 69.0 6.71e-01 100.0% 93.3%
3296833 4.1.1.300 beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.77 69.0 5.09e-01 100.0% 76.8%
3274551 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.77 67.0 6.00e-01 96.4% 73.3%
3374228 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 63.0 6.15e-01 90.9% 100.0%
3401559 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.76 70.0 6.58e-01 100.0% 93.8%
3231704 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 61.0 5.79e-01 87.3% 95.4%
3830763 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.76 66.0 5.80e-01 96.4% 66.3%
3395948 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.75 65.0 6.54e-01 94.5% 94.5%
3391556 4.1.1.384 beta barrels › SH3 › SH3 › SH3 › Tudor_krimper_1st 0.75 64.0 5.23e-01 98.2% 75.2%
3263031 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 64.0 6.10e-01 96.4% 89.2%
3348231 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 63.0 5.85e-01 96.4% 91.4%
3166548 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.66 52.0 4.00e-01 87.3% 72.8%
D3 high residues 124-182
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k4yA00 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.64 54.0 4.90e-01 100.0% 88.4%
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.64 53.0 4.86e-01 98.3% 90.4%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.62 51.0 4.80e-01 98.3% 100.0%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.62 44.0 4.25e-01 79.7% 77.5%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.59 49.0 4.62e-01 100.0% 100.0%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 45.0 4.00e-01 89.8% 78.0%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 45.0 3.65e-01 89.8% 76.9%
2xetB00 2.60.40.2070 Mainly Beta › Sandwich › Immunoglobulin-like › PapC, C-terminal domain 0.57 43.0 3.83e-01 93.2% 55.7%
4z32C02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 45.0 3.88e-01 89.8% 86.9%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 46.0 4.45e-01 91.5% 86.4%
3l48A01 2.60.40.2070 Mainly Beta › Sandwich › Immunoglobulin-like › PapC, C-terminal domain 0.56 43.0 4.05e-01 86.4% 94.7%
1yb3A00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.55 47.0 3.48e-01 100.0% 37.6%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 42.0 3.37e-01 89.8% 48.1%
2cs0A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 44.0 3.77e-01 91.5% 93.7%
4ye4H01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.49e-01 100.0% 88.1%
1r0aH01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.48e-01 100.0% 87.0%
6ovnB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 3.53e-01 100.0% 87.2%
2yyoA00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.51 41.0 3.20e-01 100.0% 92.5%
2kmsA02 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.51 34.0 3.45e-01 83.1% 70.7%
2druA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.62e-01 100.0% 85.4%
4bfiB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 41.0 3.49e-01 100.0% 82.1%
2f09A00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.50 39.0 3.60e-01 89.8% 90.2%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 36.0 3.60e-01 81.4% 89.2%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3840072 4.2.1.0 beta barrels › SH3 › SAND › SAND 0.64 53.0 4.76e-01 96.6% 83.5%
3386779 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.63 52.0 4.93e-01 96.6% 100.0%
5077873 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.63 52.0 4.88e-01 100.0% 93.7%
5063688 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.63 53.0 4.71e-01 100.0% 84.3%
3839852 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.62 51.0 4.82e-01 96.6% 100.0%
2499682 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.61 52.0 4.82e-01 100.0% 96.2%
5012053 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.61 50.0 4.76e-01 98.3% 100.0%
1678740 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.60 50.0 4.66e-01 100.0% 97.4%
3427502 239.3.1.0 beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain 0.59 46.0 3.76e-01 89.8% 45.6%
3485485 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.59 45.0 3.61e-01 83.1% 84.2%
4010727 11.1.4.25 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PapC_C 0.57 44.0 4.01e-01 94.9% 61.3%
4008068 11.1.4.25 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PapC_C 0.57 44.0 3.92e-01 86.4% 91.1%
4179795 11.1.4.25 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PapC_C 0.56 43.0 3.89e-01 84.7% 90.6%
3997447 5.1.4.303 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS2_N, BBS2_Mid 0.56 41.0 2.69e-01 81.4% 89.2%
3528458 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.56 45.0 3.78e-01 88.1% 94.0%
4009974 11.1.4.25 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PapC_C 0.56 43.0 3.87e-01 86.4% 87.1%
3515495 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 46.0 4.01e-01 96.6% 67.4%
3769735 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.55 44.0 3.72e-01 86.4% 78.0%
5015352 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 42.0 3.90e-01 91.5% 74.7%
4927545 243.6.1.9 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.54 38.0 3.59e-01 72.9% 92.9%
3889426 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 41.0 3.58e-01 88.1% 54.7%
3718984 375.10.1.0 few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha 0.52 42.0 4.12e-01 93.2% 95.4%