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NC_042091.1__YP_009620749.1__FDJ16_gp083__00080
Bact-VirNC_042091.1__YP_009620749.1__FDJ16_gp083__00080
Identity
- Accession:
- NC_042091 ↗
- Kingdom:
- phage
Quality
64.2
mean pLDDT
Taxonomy
TaxID: 2048977
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-78
D2
medium
residues 148-182
Domain cluster:
representative
CATH (74)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.99 | 91.0 | 7.33e-01 | 100.0% | 56.5% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.97 | 88.0 | 5.71e-01 | 100.0% | 34.3% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.96 | 87.0 | 6.70e-01 | 100.0% | 47.9% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.96 | 88.0 | 7.61e-01 | 100.0% | 74.5% |
| 1y6xA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.94 | 84.0 | 6.14e-01 | 100.0% | 43.7% |
| 1vf6C00 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.94 | 85.0 | 7.40e-01 | 100.0% | 72.5% |
| 2l1lB00 | 1.20.1440.250 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.94 | 84.0 | 5.55e-01 | 100.0% | 27.6% |
| 3kkbA00 | 1.20.120.880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain | 0.94 | 84.0 | 5.55e-01 | 100.0% | 31.7% |
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.94 | 84.0 | 5.38e-01 | 100.0% | 34.0% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.93 | 82.0 | 4.86e-01 | 100.0% | 14.8% |
| 2chnB03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.93 | 82.0 | 5.06e-01 | 100.0% | 19.4% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.93 | 82.0 | 5.03e-01 | 100.0% | 18.7% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.93 | 83.0 | 5.08e-01 | 100.0% | 19.3% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.92 | 81.0 | 5.54e-01 | 100.0% | 30.7% |
| 6epyA01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.92 | 80.0 | 4.68e-01 | 100.0% | 13.7% |
| 4iggB02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.92 | 82.0 | 5.51e-01 | 100.0% | 28.9% |
| 6srbA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.91 | 81.0 | 5.58e-01 | 100.0% | 33.0% |
| 3dboB00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.91 | 82.0 | 5.42e-01 | 100.0% | 27.8% |
| 2a26B01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.91 | 79.0 | 7.40e-01 | 100.0% | 79.5% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.91 | 80.0 | 7.20e-01 | 100.0% | 72.9% |
| 3fseB02 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.91 | 79.0 | 5.15e-01 | 100.0% | 24.3% |
| 2gw1A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.91 | 79.0 | 4.47e-01 | 100.0% | 9.7% |
| 4fxdA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.91 | 78.0 | 5.05e-01 | 100.0% | 22.9% |
| 7k3zG01 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.90 | 80.0 | 4.79e-01 | 100.0% | 16.4% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.90 | 77.0 | 5.42e-01 | 100.0% | 32.4% |
| 4he8D00 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.90 | 77.0 | 4.95e-01 | 100.0% | 21.9% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.90 | 77.0 | 5.55e-01 | 100.0% | 36.1% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.90 | 77.0 | 4.78e-01 | 100.0% | 18.4% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.90 | 76.0 | 4.96e-01 | 100.0% | 23.3% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.89 | 79.0 | 5.22e-01 | 100.0% | 25.9% |
| 5isuA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.89 | 75.0 | 4.54e-01 | 97.1% | 16.1% |
| 1ezjA01 | 1.10.287.320 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Viral phosphoprotein oligmorisation site domain | 0.89 | 75.0 | 6.17e-01 | 94.3% | 53.2% |
| 7eu3E01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.88 | 74.0 | 5.59e-01 | 100.0% | 40.2% |
| 8anqA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.87 | 74.0 | 4.49e-01 | 100.0% | 15.6% |
| 5cy5B00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.87 | 72.0 | 4.76e-01 | 100.0% | 23.5% |
| 1xioA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.86 | 73.0 | 4.47e-01 | 100.0% | 16.1% |
| 6k6iA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.86 | 73.0 | 4.45e-01 | 100.0% | 16.0% |
| 3m1cB01 | 3.30.390.170 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.86 | 66.0 | 4.68e-01 | 100.0% | 28.4% |
| 3no6A00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.86 | 73.0 | 4.37e-01 | 100.0% | 14.9% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.86 | 71.0 | 5.66e-01 | 100.0% | 60.0% |
| 1uiuA02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.86 | 72.0 | 4.35e-01 | 100.0% | 15.8% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.86 | 72.0 | 5.66e-01 | 100.0% | 51.3% |
| 3rkoG00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.85 | 71.0 | 5.18e-01 | 100.0% | 35.0% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.85 | 72.0 | 4.24e-01 | 100.0% | 12.7% |
| 3rm5B02 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.85 | 69.0 | 4.19e-01 | 100.0% | 15.2% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.85 | 71.0 | 5.34e-01 | 100.0% | 39.6% |
| 3bvoA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.84 | 69.0 | 5.33e-01 | 100.0% | 60.5% |
| 1vw4L01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.84 | 69.0 | 4.63e-01 | 97.1% | 25.2% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.84 | 68.0 | 5.38e-01 | 100.0% | 43.6% |
| 7cj3A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.84 | 69.0 | 4.13e-01 | 100.0% | 13.6% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.84 | 70.0 | 5.56e-01 | 100.0% | 46.7% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.84 | 70.0 | 6.04e-01 | 100.0% | 62.1% |
| 2y8nA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.83 | 70.0 | 3.73e-01 | 100.0% | 4.0% |
| 2y4tA02 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.83 | 67.0 | 5.96e-01 | 100.0% | 63.5% |
| 3q1pA01 | 6.10.250.1120 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.83 | 68.0 | 6.60e-01 | 94.3% | 87.2% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.82 | 66.0 | 4.50e-01 | 100.0% | 24.8% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.81 | 70.0 | 5.43e-01 | 100.0% | 46.1% |
| 3b34A05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.81 | 64.0 | 3.73e-01 | 97.1% | 20.3% |
| 4hkaA02 | 1.10.287.3810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.80 | 64.0 | 5.89e-01 | 100.0% | 68.6% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 66.0 | 5.35e-01 | 100.0% | 58.3% |
| 1v0dA01 | 6.10.140.170 | Special › Helix non-globular › Helix Hairpins › | 0.80 | 68.0 | 6.16e-01 | 100.0% | 71.4% |
| 4l7mA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.79 | 67.0 | 4.01e-01 | 100.0% | 13.4% |
| 6humG01 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.79 | 63.0 | 4.21e-01 | 100.0% | 21.9% |
| 3ea5D00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.79 | 67.0 | 3.56e-01 | 100.0% | 4.2% |
| 3zciA00 | 1.20.58.1660 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 68.0 | 4.23e-01 | 100.0% | 53.9% |
| 2xevB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.78 | 66.0 | 4.53e-01 | 100.0% | 29.8% |
| 1gw5A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.77 | 63.0 | 3.45e-01 | 97.1% | 6.0% |
| 2x19B00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.77 | 62.0 | 3.32e-01 | 100.0% | 4.6% |
| 4fd4A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.76 | 57.0 | 3.64e-01 | 100.0% | 16.0% |
| 2q0oA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.74 | 61.0 | 3.95e-01 | 97.1% | 20.8% |
| 3e98B00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.72 | 59.0 | 3.87e-01 | 100.0% | 21.3% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.72 | 57.0 | 4.34e-01 | 100.0% | 68.4% |
| 2wzkA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.71 | 60.0 | 4.13e-01 | 100.0% | 59.1% |
| 1m56C01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 44.0 | 3.86e-01 | 100.0% | 52.2% |
ECOD (97)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3699638 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.99 | 92.0 | 4.89e-01 | 100.0% | 5.3% |
| 3708624 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.99 | 92.0 | 4.87e-01 | 100.0% | 5.1% |
| 3171608 | 2007.1.19.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › DUF3336 | 0.99 | 90.0 | 5.67e-01 | 97.1% | 23.4% |
| 4016635 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.99 | 91.0 | 6.30e-01 | 100.0% | 35.0% |
| 3345113 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.98 | 91.0 | 5.92e-01 | 100.0% | 26.9% |
| 3595965 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.98 | 90.0 | 5.06e-01 | 100.0% | 10.6% |
| 3918098 | 604.6.1.57 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › Not3 | 0.98 | 90.0 | 6.14e-01 | 100.0% | 33.3% |
| 3692552 | 5071.3.1.0 ↗ | alpha bundles › cytochrome bc1 complex 11 kDa protein-like › DUF465 › DUF465 | 0.97 | 91.0 | 7.13e-01 | 100.0% | 53.8% |
| 4127368 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.97 | 90.0 | 7.80e-01 | 100.0% | 70.0% |
| 4965632 | 192.7.1.85 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › DUF4349 | 0.97 | 89.0 | 7.07e-01 | 100.0% | 53.8% |
| 3931081 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.97 | 84.0 | 5.44e-01 | 94.3% | 24.4% |
| 3744696 | 603.1.1.2 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Not3 | 0.97 | 89.0 | 6.09e-01 | 100.0% | 33.3% |
| 4950300 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.97 | 89.0 | 7.23e-01 | 100.0% | 58.3% |
| 3934585 | 3755.3.1.465 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A | 0.97 | 88.0 | 5.59e-01 | 100.0% | 23.3% |
| 3704286 | 604.12.1.8 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT | 0.97 | 88.0 | 6.12e-01 | 100.0% | 35.0% |
| 3551698 | 3755.3.1.54 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › THOC7 | 0.97 | 89.0 | 5.47e-01 | 100.0% | 20.6% |
| 3239859 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.97 | 88.0 | 8.01e-01 | 100.0% | 77.8% |
| 3641174 | 109.4.1.2670 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Neurobeachin, PF28615 | 0.97 | 88.0 | 4.62e-01 | 100.0% | 3.6% |
| 4485451 | 192.6.1.9 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › PF27469 | 0.96 | 88.0 | 7.40e-01 | 100.0% | 63.6% |
| 3613445 | 7563.1.1.2 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › Lysine_decarbox | 0.96 | 87.0 | 5.00e-01 | 100.0% | 13.0% |
| 3742005 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.96 | 87.0 | 6.28e-01 | 100.0% | 38.9% |
| 3441505 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.96 | 89.0 | 4.85e-01 | 100.0% | 8.0% |
| 3824631 | 109.4.1.2306 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF25999 | 0.95 | 86.0 | 4.96e-01 | 100.0% | 12.7% |
| 4160609 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.95 | 85.0 | 7.49e-01 | 100.0% | 70.0% |
| 3902068 | 109.4.1.1369 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MA3, MIF4G | 0.95 | 86.0 | 4.61e-01 | 100.0% | 6.2% |
| 5000553 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.95 | 85.0 | 6.63e-01 | 100.0% | 50.0% |
| 3570403 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.95 | 84.0 | 5.60e-01 | 100.0% | 28.0% |
| 3498914 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.95 | 84.0 | 6.00e-01 | 100.0% | 36.8% |
| 3987389 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.94 | 84.0 | 4.55e-01 | 100.0% | 6.9% |
| 3965569 | 150.1.1.183 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Transposase_20 | 0.94 | 85.0 | 5.23e-01 | 100.0% | 19.4% |
| 3992031 | 548.1.1.0 ↗ | alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain | 0.94 | 83.0 | 7.30e-01 | 97.1% | 68.0% |
| 4102849 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.94 | 84.0 | 5.57e-01 | 100.0% | 28.0% |
| 3718848 | 1132.1.1.0 ↗ | extended segments › Mitochondrial complex I, B16.6 subunit › Mitochondrial complex I, B16.6 subunit › Mitochondrial complex I, B16.6 subunit | 0.94 | 83.0 | 5.80e-01 | 100.0% | 33.3% |
| 4403724 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.94 | 84.0 | 7.73e-01 | 100.0% | 77.8% |
| 3298870 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.94 | 84.0 | 5.82e-01 | 100.0% | 33.3% |
| 4422869 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.94 | 83.0 | 5.85e-01 | 100.0% | 35.0% |
| 3600065 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.93 | 83.0 | 4.54e-01 | 100.0% | 7.6% |
| 4590991 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.93 | 82.0 | 7.41e-01 | 100.0% | 72.9% |
| 5003155 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.93 | 82.0 | 5.06e-01 | 100.0% | 18.9% |
| 5016885 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.93 | 83.0 | 6.66e-01 | 100.0% | 53.8% |
| 3934372 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.93 | 83.0 | 5.04e-01 | 100.0% | 18.1% |
| 3498716 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.93 | 82.0 | 5.65e-01 | 100.0% | 31.8% |
| 3492075 | 3729.1.1.1 ↗ | alpha arrays › Legumain prodomain › Legumain prodomain › Legumain prodomain › Legum_prodom | 0.93 | 85.0 | 5.60e-01 | 100.0% | 28.2% |
| 3290879 | 3922.1.1.155 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF4349 | 0.93 | 82.0 | 6.45e-01 | 100.0% | 50.0% |
| 4041347 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.93 | 83.0 | 5.70e-01 | 100.0% | 31.8% |
| 3961229 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.93 | 82.0 | 5.00e-01 | 100.0% | 18.4% |
| 3977036 | 2485.4.1.1 ↗ | a+b three layers › Thioredoxin-like › Fumarate hydratase N-terminal domain › Fumarate hydratase N-terminal domain › Fumerase | 0.93 | 83.0 | 5.35e-01 | 100.0% | 24.1% |
| 3548030 | 548.1.1.1 ↗ | alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain › GRIP | 0.93 | 80.0 | 7.11e-01 | 97.1% | 68.0% |
| 4393704 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.92 | 81.0 | 4.42e-01 | 100.0% | 7.5% |
| 4248599 | 192.6.1.1 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE | 0.92 | 82.0 | 7.34e-01 | 100.0% | 72.9% |
| 3216585 | 3291.1.1.172 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › KIF21A | 0.92 | 81.0 | 5.22e-01 | 100.0% | 24.1% |
| 3661584 | 4006.1.1.6 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › DUF3475 | 0.92 | 82.0 | 4.90e-01 | 100.0% | 16.3% |
| 5008134 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.92 | 82.0 | 5.71e-01 | 100.0% | 46.7% |
| 3619577 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.92 | 81.0 | 5.92e-01 | 100.0% | 38.9% |
| 3716015 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.92 | 80.0 | 6.70e-01 | 100.0% | 58.3% |
| 4054690 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.92 | 80.0 | 7.38e-01 | 100.0% | 77.8% |
| 3603633 | 3997.1.1.1 ↗ | alpha arrays › Helical insertion domain in magnesium chelatase catalytic subunit › Helical insertion domain in magnesium chelatase catalytic subunit › Helical insertion domain in magnesium chelatase catalytic subunit › CobN-Mg_chel | 0.92 | 80.0 | 4.93e-01 | 100.0% | 18.4% |
| 3994877 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.92 | 78.0 | 5.30e-01 | 97.1% | 28.3% |
| 4551916 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.91 | 81.0 | 5.43e-01 | 100.0% | 28.0% |
| 3978513 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.91 | 78.0 | 5.99e-01 | 100.0% | 43.8% |
| 4672676 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.91 | 80.0 | 5.21e-01 | 100.0% | 25.0% |
| 3197460 | 6132.1.1.7 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › efThoc1 | 0.91 | 80.0 | 6.89e-01 | 100.0% | 63.6% |
| 3463860 | 109.4.1.84 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › API5 | 0.91 | 80.0 | 4.56e-01 | 100.0% | 10.8% |
| 4465242 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.91 | 79.0 | 7.35e-01 | 100.0% | 77.8% |
| 3215342 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.91 | 78.0 | 5.69e-01 | 100.0% | 36.8% |
| 3741785 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.91 | 78.0 | 5.60e-01 | 100.0% | 35.0% |
| 3288075 | 2004.1.1.600 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn, AAA_21 | 0.91 | 78.0 | 4.24e-01 | 100.0% | 6.5% |
| 3589429 | 4159.1.1.0 ↗ | alpha arrays › SP0561-like › SP0561-like › SP0561-like | 0.91 | 77.0 | 6.05e-01 | 100.0% | 46.7% |
| 3484694 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.91 | 78.0 | 4.44e-01 | 100.0% | 10.6% |
| 4889091 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.90 | 78.0 | 4.37e-01 | 100.0% | 9.0% |
| 4266510 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.90 | 80.0 | 5.61e-01 | 100.0% | 33.3% |
| 3302917 | 2004.1.1.505 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 | 0.90 | 77.0 | 4.41e-01 | 100.0% | 10.6% |
| 5048061 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.90 | 79.0 | 6.79e-01 | 100.0% | 63.6% |
| 2161989 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.90 | 78.0 | 7.12e-01 | 100.0% | 74.5% |
| 3982010 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.90 | 77.0 | 5.59e-01 | 100.0% | 36.8% |
| 3385229 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.90 | 76.0 | 4.32e-01 | 100.0% | 9.6% |
| 3976663 | 3812.1.1.1 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › T3SS_needle_E | 0.89 | 76.0 | 6.26e-01 | 100.0% | 53.8% |
| 4943686 | 2485.4.1.1 ↗ | a+b three layers › Thioredoxin-like › Fumarate hydratase N-terminal domain › Fumarate hydratase N-terminal domain › Fumerase | 0.89 | 78.0 | 4.94e-01 | 100.0% | 21.9% |
| 3258520 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.89 | 76.0 | 7.08e-01 | 100.0% | 77.8% |
| 3606138 | 6132.1.1.0 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain | 0.89 | 75.0 | 6.68e-01 | 100.0% | 68.0% |
| 3256857 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.88 | 77.0 | 4.39e-01 | 100.0% | 11.1% |
| 4208136 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.88 | 76.0 | 7.05e-01 | 100.0% | 77.8% |
| 5055939 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.88 | 74.0 | 4.74e-01 | 100.0% | 21.2% |
| 4397104 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.88 | 74.0 | 5.85e-01 | 100.0% | 46.7% |
| 3743018 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.88 | 75.0 | 6.17e-01 | 100.0% | 53.8% |
| 3969140 | 607.1.1.1 ↗ | alpha arrays › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › PEP-utilisers_N | 0.88 | 75.0 | 5.13e-01 | 100.0% | 30.8% |
| 4345287 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.88 | 74.0 | 5.38e-01 | 100.0% | 35.0% |
| 5037529 | 2485.4.1.1 ↗ | a+b three layers › Thioredoxin-like › Fumarate hydratase N-terminal domain › Fumarate hydratase N-terminal domain › Fumerase | 0.87 | 75.0 | 4.83e-01 | 100.0% | 22.6% |
| 3572303 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.87 | 73.0 | 4.93e-01 | 100.0% | 26.9% |
| 4948037 | 2485.4.1.1 ↗ | a+b three layers › Thioredoxin-like › Fumarate hydratase N-terminal domain › Fumarate hydratase N-terminal domain › Fumerase | 0.87 | 74.0 | 4.74e-01 | 100.0% | 21.3% |
| 4429835 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.87 | 74.0 | 5.33e-01 | 100.0% | 36.0% |
| 4952790 | 2485.4.1.1 ↗ | a+b three layers › Thioredoxin-like › Fumarate hydratase N-terminal domain › Fumarate hydratase N-terminal domain › Fumerase | 0.86 | 73.0 | 4.63e-01 | 100.0% | 20.6% |
| 5044956 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.85 | 72.0 | 4.86e-01 | 100.0% | 30.0% |
| 3289740 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.83 | 72.0 | 6.09e-01 | 100.0% | 58.3% |
| 3448515 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.82 | 68.0 | 6.43e-01 | 100.0% | 77.8% |
| 4095475 | 377.1.1.2 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S14 | 0.81 | 68.0 | 5.04e-01 | 100.0% | 37.9% |
| 3602308 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.73 | 57.0 | 4.24e-01 | 100.0% | 32.7% |