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NC_042098.1__YP_009621811.1__FDJ23_gp070__00070
Bact-VirNC_042098.1__YP_009621811.1__FDJ23_gp070__00070
Identity
- Accession:
- NC_042098 ↗
- Kingdom:
- phage
Quality
75.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Agricanvirus›
Erwinia_phage_vB_EamM_Desertfox
TaxID: 2060127
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-115
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8h6rA01 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.68 | 48.0 | 5.34e-01 | 71.7% | 97.6% |
| 1y1uA01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.67 | 50.0 | 4.17e-01 | 78.8% | 85.1% |
| 1elwA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 43.0 | 4.34e-01 | 90.3% | 65.0% |
| 1paqA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 58.0 | 5.18e-01 | 100.0% | 85.7% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.64 | 47.0 | 4.77e-01 | 80.5% | 77.2% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.64 | 42.0 | 4.12e-01 | 76.1% | 60.3% |
| 4lctB00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 45.0 | 3.21e-01 | 90.3% | 24.1% |
| 1zs3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.63 | 44.0 | 3.89e-01 | 72.6% | 89.5% |
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.63 | 55.0 | 4.92e-01 | 97.3% | 68.6% |
| 3t5vA00 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 56.0 | 4.17e-01 | 100.0% | 51.5% |
| 3a0oA02 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.63 | 55.0 | 3.90e-01 | 98.2% | 55.3% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 50.0 | 5.03e-01 | 85.0% | 98.2% |
| 2jbwA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.63 | 46.0 | 4.77e-01 | 77.9% | 84.5% |
| 6axfA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.62 | 52.0 | 5.13e-01 | 87.6% | 88.9% |
| 2qvaA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.62 | 44.0 | 4.24e-01 | 73.5% | 81.4% |
| 6hwjA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.62 | 50.0 | 3.93e-01 | 86.7% | 99.6% |
| 2fupA00 | 1.20.58.300 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like | 0.61 | 45.0 | 4.34e-01 | 77.0% | 97.6% |
| 4leuA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 48.0 | 4.12e-01 | 96.5% | 53.8% |
| 6i57A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 41.0 | 4.00e-01 | 91.2% | 66.4% |
| 4ui9Y03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 38.0 | 4.34e-01 | 89.4% | 96.2% |
| 4yvoA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 44.0 | 4.37e-01 | 92.0% | 79.8% |
| 3beeA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 39.0 | 4.28e-01 | 90.3% | 90.1% |
| 2vyiA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 41.0 | 4.00e-01 | 92.0% | 68.8% |
| 5aioA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.56 | 40.0 | 3.68e-01 | 92.0% | 55.5% |
| 1xo0A01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.56 | 38.0 | 3.89e-01 | 77.0% | 71.2% |
| 2pl2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 48.0 | 4.10e-01 | 98.2% | 67.5% |
| 6adqG01 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.54 | 44.0 | 3.81e-01 | 88.5% | 96.6% |
| 2y4tB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 39.0 | 2.85e-01 | 91.2% | 26.0% |
| 5uh5D02 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.54 | 48.0 | 4.53e-01 | 100.0% | 87.7% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.53 | 44.0 | 4.22e-01 | 89.4% | 96.9% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.53 | 35.0 | 3.92e-01 | 85.0% | 90.4% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.52 | 33.0 | 3.63e-01 | 72.6% | 79.8% |
| 7wf6A01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.52 | 39.0 | 3.68e-01 | 78.8% | 68.3% |
| 6xpdA01 | 1.20.1510.10 | Mainly Alpha › Up-down Bundle › Alpha-lytic protease prodomain-like › Cation efflux protein transmembrane domain | 0.51 | 42.0 | 3.51e-01 | 88.5% | 73.8% |
| 2yevA03 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.51 | 39.0 | 3.39e-01 | 82.3% | 64.1% |
| 7vepA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 43.0 | 3.35e-01 | 94.7% | 47.1% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3029524 | 109.3.1.473 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › TPR_8 | 0.73 | 61.0 | 4.43e-01 | 90.3% | 42.7% |
| 3467637 | 109.4.1.120 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Kinetochor_Ybp2 | 0.67 | 59.0 | 3.78e-01 | 99.1% | 29.3% |
| 3716333 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.66 | 49.0 | 4.03e-01 | 79.6% | 85.6% |
| 3411779 | 109.25.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › PF26588 | 0.64 | 54.0 | 5.42e-01 | 91.2% | 94.8% |
| 3658142 | 109.4.1.588 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FPL | 0.63 | 56.0 | 4.40e-01 | 98.2% | 69.2% |
| 3482118 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 52.0 | 3.80e-01 | 91.2% | 32.8% |
| 3599541 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 56.0 | 4.60e-01 | 99.1% | 89.5% |
| 3788679 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 54.0 | 3.83e-01 | 96.5% | 39.4% |
| 3332671 | 109.4.1.31 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MA3 | 0.62 | 49.0 | 4.28e-01 | 86.7% | 55.4% |
| 3417343 | 109.4.1.1718 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26716 | 0.61 | 51.0 | 4.98e-01 | 91.2% | 85.6% |
| 4995068 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.61 | 44.0 | 3.78e-01 | 77.0% | 89.5% |
| 3631318 | 109.4.1.98 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 46.0 | 3.91e-01 | 91.2% | 50.3% |
| 3928679 | 109.4.1.557 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TTC7_N | 0.59 | 48.0 | 3.81e-01 | 88.5% | 61.7% |
| 3484490 | 109.4.1.584 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fis1_TPR_C | 0.59 | 45.0 | 4.42e-01 | 82.3% | 74.4% |
| 3697221 | 109.4.1.280 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PSD13_N | 0.58 | 51.0 | 3.89e-01 | 98.2% | 58.9% |
| 3995816 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.58 | 40.0 | 4.42e-01 | 70.8% | 100.0% |
| 5012658 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.57 | 30.0 | 3.29e-01 | 70.8% | 61.1% |
| 3382232 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.56 | 50.0 | 3.95e-01 | 100.0% | 59.2% |
| 5074236 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 49.0 | 4.66e-01 | 100.0% | 87.9% |
| 4026221 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 48.0 | 3.99e-01 | 100.0% | 80.5% |
| 3308682 | 109.20.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Coatomer subunit alpha C-terminal domain › Coatomer subunit alpha C-terminal domain | 0.54 | 45.0 | 3.15e-01 | 90.3% | 31.7% |
| 3351359 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.54 | 44.0 | 3.48e-01 | 88.5% | 48.6% |
| 4991029 | 3896.1.1.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase | 0.54 | 48.0 | 3.98e-01 | 100.0% | 92.2% |
| 5021157 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.54 | 42.0 | 4.46e-01 | 100.0% | 97.0% |
| 3593517 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 40.0 | 3.75e-01 | 93.8% | 63.3% |
| 4027810 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 46.0 | 4.12e-01 | 98.2% | 88.7% |
| 3520892 | 109.4.1.339 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TRAPPC-Trs85 | 0.52 | 43.0 | 3.83e-01 | 90.3% | 69.7% |
| 2878134 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.52 | 40.0 | 3.77e-01 | 83.2% | 84.3% |
| 3464775 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.51 | 45.0 | 3.19e-01 | 99.1% | 39.1% |
D2
high
residues 148-229
Domain cluster:
rep: MW879340.1__QXO10699.1__pEaSNUABM48_00231__00229__D143-222
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ynjD04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.70 | 64.0 | 5.24e-01 | 100.0% | 56.6% |
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 33.0 | 3.36e-01 | 81.7% | 53.6% |
| 1wgfA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.58 | 36.0 | 4.33e-01 | 73.2% | 98.1% |
| 1ez0B01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.57 | 51.0 | 3.42e-01 | 97.6% | 44.6% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 45.0 | 3.97e-01 | 87.8% | 74.0% |
| 3pqaB01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.57 | 51.0 | 3.48e-01 | 97.6% | 45.6% |
| 7w5lA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 51.0 | 3.53e-01 | 97.6% | 50.0% |
| 5kf6A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 51.0 | 3.53e-01 | 97.6% | 44.3% |
| 1t90A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 49.0 | 3.36e-01 | 95.1% | 45.4% |
| 3rosA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 50.0 | 3.47e-01 | 97.6% | 47.4% |
| 3r64A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 51.0 | 3.47e-01 | 98.8% | 44.6% |
| 4i3vA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 50.0 | 3.44e-01 | 97.6% | 48.7% |
| 4nmyA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 46.0 | 3.54e-01 | 92.7% | 73.6% |
| 5ekcF01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 50.0 | 3.38e-01 | 97.6% | 45.1% |
| 1uxtA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 50.0 | 3.43e-01 | 97.6% | 47.6% |
| 4jz6A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 51.0 | 3.50e-01 | 97.6% | 50.2% |
| 2hg2A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 51.0 | 3.44e-01 | 100.0% | 66.4% |
| 6fjxA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 50.0 | 3.41e-01 | 97.6% | 46.9% |
| 5ucdA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 49.0 | 3.53e-01 | 97.6% | 58.2% |
| 2cs1A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.55 | 36.0 | 3.50e-01 | 73.2% | 59.8% |
| 5izdA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 49.0 | 3.32e-01 | 97.6% | 44.7% |
| 1xqoA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.54 | 42.0 | 3.62e-01 | 84.1% | 65.9% |
| 7cyuA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.54 | 34.0 | 3.83e-01 | 80.5% | 89.5% |
| 2obpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 32.0 | 3.25e-01 | 85.4% | 58.0% |
| 2j6lA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.54 | 48.0 | 3.25e-01 | 97.6% | 43.0% |
| 2e6oA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.54 | 35.0 | 3.46e-01 | 74.4% | 62.1% |
| 1bi0A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.54 | 40.0 | 4.28e-01 | 89.0% | 100.0% |
| 2co9A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.53 | 34.0 | 3.19e-01 | 73.2% | 52.0% |
| 5zr4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.77e-01 | 90.2% | 66.7% |
| 5cbgA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 38.0 | 3.55e-01 | 92.7% | 61.8% |
| 3phuA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.52 | 45.0 | 3.66e-01 | 98.8% | 67.3% |
| 1qrvA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.52 | 33.0 | 3.50e-01 | 78.0% | 74.0% |
| 4rayA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 34.0 | 3.40e-01 | 90.2% | 67.1% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2968637 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.81 | 77.0 | 5.87e-01 | 100.0% | 50.9% |
| 2886100 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.77 | 72.0 | 5.32e-01 | 100.0% | 44.3% |
| 3215052 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.68 | 41.0 | 4.11e-01 | 100.0% | 58.8% |
| 4025313 | 3721.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 | 0.61 | 44.0 | 4.75e-01 | 98.8% | 90.0% |
| 5078625 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.60 | 44.0 | 3.68e-01 | 78.0% | 52.4% |
| 4530965 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.57 | 52.0 | 3.47e-01 | 97.6% | 44.9% |
| 3952262 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.56 | 34.0 | 3.43e-01 | 97.6% | 57.6% |
| 3958490 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 34.0 | 3.46e-01 | 97.6% | 61.3% |
| 5001553 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.56 | 43.0 | 3.71e-01 | 92.7% | 51.1% |
| 3972745 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.55 | 50.0 | 3.46e-01 | 97.6% | 49.8% |
| 5001480 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.55 | 42.0 | 3.54e-01 | 81.7% | 52.1% |
| 3989244 | 183.1.1.1 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C | 0.55 | 41.0 | 4.18e-01 | 92.7% | 83.7% |
| 5012052 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.55 | 41.0 | 3.59e-01 | 87.8% | 51.5% |
| 4861507 | 183.1.1.1 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C | 0.54 | 42.0 | 4.30e-01 | 84.1% | 93.4% |
| 4963579 | 183.1.1.1 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C | 0.54 | 41.0 | 3.53e-01 | 89.0% | 49.6% |
| 5042174 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.54 | 41.0 | 3.53e-01 | 90.2% | 49.6% |
| 4985324 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.54 | 42.0 | 3.47e-01 | 93.9% | 45.2% |
| 2427 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.54 | 36.0 | 3.55e-01 | 73.2% | 63.3% |
| 4946879 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.54 | 40.0 | 3.50e-01 | 80.5% | 96.2% |
| None | — | 0.54 | 40.0 | 3.50e-01 | 91.5% | 50.8% | |
| 5050879 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.53 | 42.0 | 3.61e-01 | 92.7% | 52.6% |
| None | — | 0.53 | 36.0 | 3.42e-01 | 74.4% | 58.8% | |
| 3402349 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.53 | 32.0 | 3.63e-01 | 82.9% | 83.3% |
| 5084071 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.53 | 43.0 | 3.67e-01 | 91.5% | 97.1% |
| 4947694 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.52 | 39.0 | 3.35e-01 | 81.7% | 95.7% |
| 4933412 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.52 | 44.0 | 3.68e-01 | 95.1% | 98.6% |
| None | — | 0.52 | 39.0 | 3.38e-01 | 92.7% | 49.6% | |
| 3268169 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.52 | 34.0 | 3.24e-01 | 73.2% | 56.0% |
| 4039721 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.51 | 36.0 | 3.17e-01 | 82.9% | 45.9% |
| 3930859 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.51 | 34.0 | 3.51e-01 | 78.0% | 74.7% |
| 5025254 | 183.1.1.1 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C | 0.51 | 38.0 | 3.28e-01 | 97.6% | 48.9% |
| 3767264 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.50 | 34.0 | 3.02e-01 | 79.3% | 47.5% |