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NC_042098.1__YP_009621870.1__FDJ23_gp129__00129

Bact-Vir

NC_042098.1__YP_009621870.1__FDJ23_gp129__00129

Identity

Accession:
NC_042098 ↗
Kingdom:
phage

Quality

81.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-91
PDB
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hwiB01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.67 47.0 5.17e-01 86.2% 90.1%
6larC01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 42.0 4.57e-01 87.4% 86.8%
3l4gB02 3.50.40.10 Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 0.55 39.0 3.03e-01 74.7% 88.9%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4888497 221.1.1.18 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG8 0.73 55.0 5.60e-01 86.2% 81.2%
3591958 221.13.1.0 a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain 0.63 55.0 4.97e-01 95.4% 95.8%
3607986 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.62 45.0 4.79e-01 86.2% 89.3%
3591542 221.1.1.18 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG8 0.61 54.0 5.03e-01 97.7% 83.6%
3279488 304.48.1.48 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 0.61 44.0 3.65e-01 77.0% 84.2%
4351751 865.1.1.0 beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain 0.57 41.0 3.21e-01 75.9% 88.2%
1514169 244.1.1.9 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GMC_oxred_C 0.57 44.0 3.59e-01 85.1% 83.1%
3477291 865.1.1.0 beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain 0.55 39.0 2.87e-01 74.7% 83.7%
3417226 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 3.54e-01 96.6% 60.9%